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MTF#546 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#546
  • Sequence Type
    cDNA
  • ID
    MGI:3506264
  • Region Covered
    Nucleotides 361-1106 of GenBank Accession ID AF173871.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.745kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCGGAATTCTGGAACCTGAGGATGGAAGGC and CCCAAGCTTTTCCCTACGATGTCTACAGGG. Template sequence provided by Paul Gray:
    GGNCGCCAGTGTGATGGATATCTGCAGAATTCGCCCTTCCGGAATTCTGGAACCTGAGGA
    TGGAAGGCCCTCCACCAAACACCTCAGTAAAAGGTGNACAGNGCAAGGCGGAGNCCCAGC
    NCNCTGGCCATNGANGTNNTTGAANCNNATTTGGNTATAGNCACATTTTGCNTTNNCTGG
    ATGGGTNCGGATTNGCACTNGNTCNAGANNGAAAATNTTTGTNNNTNTCNGANNCCGACT
    CTNTCTNNNTNTGCCTCTNACTNGCGGAGCTGANNNGNANCAGCNTCTTTGACTATGNCN
    ACCCNGGGNACNACGAGNANATGGAAAAGNANCNGGNCNTGNANCTNCCGCNTGGGCNNG
    GTCTCCTCTNNCNCGGNACCGCANANGACGNGGACNNNTCNNNATCTTCCTCTTCTNNTT
    CTCAGACCCATGANCCNGAGGAGACGAACANCNCTAGTCNGNTNNNGACGGACAACNNCC
    TTGAACNNGNCTTTTTCNTNNNAATGAAANCNACTCNGACNNNNANNGNAGTCNNCAGTC
    AAGNNNTCTGGGTNTNNGGNGATTNANATNACAAGACGGCTTCGNCTCNGANTGTCACTG
    TCCCTNTGNAGGACCNNNACCANCCCNATCATGANTCTGGGGGTTGTGGCTGAGGCCTTG
    CCTTTGCCTACGANTAATGNAATCNGAATNGAATGTNANAGGCTCATNNCTCNCGNTAAN
    ATGNATCTGAATATCATTTNNCTGTGAAAGTGNAATTAGGGATTNCGTGNANCTGACCCC
    TGGCCCNCGTCGAAGGGAAAAGCTNGAGCATGGNGAATTNCAANTCACTGGCGGGNGGTT
    ACTATTGGATCCGANTNCGACCCCNCCCCGAGGCNAAGNTGNGNTGCAATTTNGGCACCT
    TAACCNATTGNCNTAGCCTGNCNNNGCCGGTTCCCGGTTCCNATNGAAATTGGGTCCCAN
    TCCCNTTCCAANANAAATCCGGAGCNTAAAAGGNAAANGCCGGGGGCGN
  • Synonyms
    GUDMAP:5579 probe, maprobe:299
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Npas3 neuronal PAS domain protein 3
Expression
  • Assay Results
    46
Sequences
AF173871 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory