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MTF#544 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#544
  • Sequence Type
    cDNA
  • ID
    MGI:3506262
  • Region Covered
    Nucleotides 191-922 of GenBank Accession ID U77967.
  • Vector Type
    Plasmid
  • Insert Site
    XbaI/XhoI
  • Insert Size
    0.731kb
  • Note
    Fragment was generated by PCR with primers TGCTCTAGACGCAGCGCAAAGAGAAGTCCCG and CCGCTCGAGCAAGGGCTACAAGACCCAGGG. Template sequence provided by Paul Gray:
    GCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGCCCTTTGCTCTAGACGCGC
    AAAGAGAAGTCCCGCAACGCTGCGCGCTGGCGACGCGGGAAGGAAAATCTGGAGTTCTTC
    GAGCTAGCCAAGCTGCTCCCTCTGCCCGGTGCCATCTCCAGCCAGCTGGACAAGGCGTCC
    ATCGTGCGTCTTAGCGTCACCTACCTCCGCCTGCGTCGTTTTGCCGCGCTGGGGGCGCCG
    CCCTGGGGGTTGCGGGCCGTCGGGCCTCCGGCTGGCCTCGCCCCAGGCCGCCGAGGCCCT
    GTGGCTCTGGTCTCTGAAGTCTTCGAGCAACACCTAGGTGGACACATCCTACTGTCCTTG
    GATGGCTTCGTGTTCGCTTTGAACCAGGAAGGGAAATTTCTCTACATCTCAGAGACAGTG
    TCCATCCACCTGGGTCTCTCACAGGTGGAGCTGACGGGCAGCAGCGTCTTCGACTACATC
    CATCCTGGGGACCACTCGGAGGTCCTAGAGCAACTTGGATTGCGGGCTGCAAGCATCGGT
    CCCCCTACACCACCTTCCGTGTCCTCCTCTTCCTCATCGTCTTCCTCCTCGCTGGTGGAC
    ACCCCTGAGATTGAAGCCAGCCCCACCGAGGCATCGCCTGCCTTCCGAGCCCAAGAGCGG
    TCCTTCTTTGTCCGCATGAAGTCCACCCTCACCAAGAGGGGCCCTGAATGTCAAAGCCTC
    GGGGTACAAGGTCATTCATGTGACAGGGCGCCTGANGGCCCGAGCCCTGGGTCTTGTAGC
    CCTTGCTCGAGCGGAAGGGCGAATCCAGCACACTGGCGGNCGTTACTAGTGGATCCNAGC
    TCGGTACNAGCNTGATGCATAGCTNGANTATCTANAGNGNCNCCNAATAGCNNGGCNAAT
    CANGGCCNAGCTGTTTCCNGGGGAAATTGTTTCCCCTCNAATNCCCACAANANACNNNCC
    GNAGCAAAA
  • Synonyms
    GUDMAP:5577 probe, maprobe:297
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Npas1 neuronal PAS domain protein 1
Expression
  • Assay Results
    46
Sequences
U77967 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:171421 Vandunk C, et al., Development, maturation, and necessity of transcription factors in the mouse suprachiasmatic nucleus. J Neurosci. 2011 Apr 27;31(17):6457-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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03/25/2025
MGI 6.24 		The Jackson Laboratory