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MTF#543 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#543
  • Sequence Type
    cDNA
  • ID
    MGI:3506261
  • Region Covered
    Nucleotides 305-1040 of GenBank Accession ID D79209.
  • Vector Type
    Plasmid
  • Insert Site
    XbaI/XhoI
  • Insert Size
    0.735kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers TGCTCTAGAATGGCTTCATCTTCGTGGTGGC and CCGCTCGAGTCTGTGAGGACGTAGTTGACGC. Template sequence provided by Paul Gray:
    GGNCGCCAGTGTGATGGATATCTGCAGAATTCGCCCTTCCGCTCGAGTCTGTGAGGACGT
    AGTTGACGCTGACGATGCAGTGCGGCCTGGAGGAGCGGCTGTTGTGTACGATGGTGGCGT
    AACTCTGCACCCAGACCCAGCCGCCCTGCTTCGCCAAGAACCTGTAGTACTTGGTGGTCA
    CTTGTCCCTTCACCAACAGTAAGTGGTGTGCACAGCGTAGGTGGAAGGTGTCACAGCCAT
    GCACGTGATGGTACAGGGTCTTCTCAATCAAGTCCTGAGGTTCATATCCAGTCAGCTCTG
    CCACCCTGGAGTCCAGGAAAATAAGCTTCATATCCAGACTGGCTCGGAACATGAACATGT
    TGCTGTGTAGTTTGATCTCTGTCACAGCACTCGGAGGCAGGGAGTGACCCACAGCCACCA
    AGCCCACATTTTGGTAGCATCCATCAAAGGGAGACATATCCAGGCTGTACTGGCGGATCT
    TCAGGTAGCCACTACAGTGAATGACCTTGTAGCCACCGCAGGTGAGGCCAGCATTCCGCT
    TGGCCAAAACACACTTCATCCTTAGAAAGAAGGAGCGTTCGATCTCGTACTCCTGTACAA
    AGTGAGAGTGGTAGGGCTGATGGGCTGTGAGCACGGCTGTCATCTCATCGTGGTCAGCCG
    GGTGGATATATTCATAGATGCTGTTCCCAGTCAGCTCTACCTGAGAAAGGCCCAGGTGAA
    CTGAAGCTGTCTCTGAAATGTATATGATCTTCCCATCTGGGGCACCACGAAGATGAAGCC
    ATTCTAGAGCAAANGGCGAATTCCAGCACACTGGCGGCCGTTACTAGTGGATCCGAGCTC
    GGTACNAGCTTGATGCATAGCTTGAGTATTCTATAGTNNCNCCTAAATAGCTTGGCGTAA
    TCATGGNCATAGCTGTTTCCTGGGTGAAATTGNTTTCCGCTCNAANTCCCCNCACCATAN
    CNANCCGGAAGCATAANGGTAAAGCCTGGGGGGGCCTAATGAGNGACN
  • Synonyms
    GUDMAP:5576 probe, maprobe:296
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Sim1 single-minded family bHLH transcription factor 1
Expression
  • Assay Results
    48
Sequences
D79209 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory