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MTF#538 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#538
  • Sequence Type
    cDNA
  • ID
    MGI:3506256
  • Region Covered
    Nucleotides 251-1032 of GenBank Accession ID BC011080.
  • Vector Type
    Plasmid
  • Insert Site
    XbaI/XhoI
  • Insert Size
    0.781kb
  • Note
    Fragment was generated by PCR with primers TGCTCTAGAATCAGCGACTTCATGTCTCCG and CCGCTCGAGGTGCTGTGGATTGTGCAGAAGC. Template sequence provided by Paul Gray:
    GNNCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGCCCTTTGCTCTAGAATCAG
    CGACTTCATGTCTCCGGGCCCCACCGACCTACTCTCCGGTTCCCTGGGCACCAGTGGTGT
    GGACTGCAATCGCAAGAGGAAAGGCAGTGCCACTGACTACCAACTTGATGACTTTGCTTT
    TGAAGAAAGTATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATGCAGAACA
    CCAAGGAAGGATCAAGAATGCAAGGGAGGCCCACAGTCAGATTGAAAAGAGGCGTCGGGA
    CAAAATGAACAGTTTCATTGATGAATTGGCTTCTTTGGTACCAACATGCAATGCAATGTC
    CAGGAAGTTAGATAAACTCACCGTGCTAAGGATGGCTGTTCAGCACATGAAAACTTTGAG
    AGGTGCCACCAACCCATACACAGAAGCAAACTACAAGCCAACATTTCTATCAGATGACGA
    ACTGAAACACCTAATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCG
    AGGGAAGATCCTCTTTGTCTCCGAGTCTGTCTTCAAGATCCTCAATTATAGCCAGAATGA
    CCTTATTGGCCAGAGCTTGTTTGACTACCTGCATCCAAAAGATATTGCCAAAGTTAAGGA
    ACAGCTATCTTCCTCGGACACTGCGCCCCGGGGAGCGACTCATTGATGCCNAGACTGGAC
    TTCCCGGTTAAAACGGATATAACCCCCTGGGCCCTCCCGGCTATGCTCTGGAGCCCGCCG
    CTCTTTCTTCTGTANAATGAAGTGCAACAGGCCTTCAGTAANGGGGAAGATAANGACNTC
    GCCCNCTACCTGTTCAAAGAAAAAACAGATCGAAAAGCTTCNGCCNATCCAAAGCACCTC
    CAGCGGAAGGGGNATTCCAGCNNCTGGNGGCCGTTACTAGNGGATCCNNCNCGGTACNAC
    CTGAGNCTACCTTGGGNTTCNAAAGGGCCCNAAAAACTTGGNGAAN
  • Synonyms
    GUDMAP:5571 probe, maprobe:291
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Bmal1 basic helix-loop-helix ARNT like 1
Expression
  • Assay Results
    57
Sequences
BC011080 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:152838 Fu H, et al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development. J Neurosci. 2009 Sep 9;29(36):11399-408
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory