About   Help   FAQ
MTF#536 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#536
  • Sequence Type
    cDNA
  • ID
    MGI:3506254
  • Region Covered
    Nucleotides 259-940 of GenBank Accession ID AY005163.
  • Vector Type
    Plasmid
  • Insert Site
    XbaI/XhoI
  • Insert Size
    0.681kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers TGCTCTAGAAAGCTCAGCGTCTTGAGGAGGG and CCGCTCGAGAGCGAGTTATGAACTCAGCCGG. Template sequence provided by Paul Gray:
    GNNTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGCCCTTCCGCTCGAGAGCG
    AGTTATGAACTCAGCCGGTCTCACGTTGATCTTGCCACTCTTTTGAGGGACAATGTATGG
    ATGCAACCGTCCCATAGCCACAAGGCAGGTAAGAGGACCGCTGTCCTTCCCACCACCCGA
    CTCTTTCTCCATGCCAACAACATTCAGAGGCCAGCTTCTCAAGTATCCAGTGCAATGGAC
    GGTGTGGAATTTTCTATGGTCTTTCTTCTTTGAGCAGGACGAGCATGGCTGCTCTTCTTT
    GACAGGGACGGTACAGCTCTTCATTTTTTGGTGTCTATAGGTTTCTCTCTTGGTGAACCA
    TCACAAGAAAGTTGTTCCTTTACTTTGGCGACGTCTTTTGGGTGTAAGAAGTCAAACAAA
    TTCTGTCCTATCAAGCTAGCCTGATCATAACGCAGTGTTTTGGAGACAGACTTANAAACG
    TAAAAAAATTCTCCCCTCTTTCGCATCCAACCCACAAACAGGAAAGGCCTTCTGCCTGCC
    TTGAANGATTAAGNTGAACTGAGTTCCTTGTCCCTGAAATAAATGAAAGGGTTTNAGAAG
    TTTTTCCTCCCTAAATTAAAANGCTNCCGTTACATGGCCCNTCTTCGAGAANAANCNTNT
    AAGGTTACCCTGCNNCNCGNCCCCTCNCTTCCAANGANCGGCCTTGAAGNCTTTTTCNTN
    GGANNCAANAAGGGGNGCNGAAATTTNCCCANTCCAACANACTTGNAGCCNGGCCCCGNT
    TTACCTATAGGGTGGNGAATTCCCGNNAANCNNNTCGAGGCNTACCCCNCNAAGCNCTTT
    TGGNAACTNGANGCCNTAAANCTCTCTTTGGGGACGGCAATNTTCCCCTNATACAGGNTN
    NGGNANCCCCCCNCCTTAAAAANATATAACCTTCNTGGGGGCCCGNNTAAAATTTCCACT
    NGGGGGNCCCCACTANNACCCTNGNNATTTTTCCCCCCNGGGGGGGGGGAGAAAAAANNT
    GGNTTAANTANCCNCGNGNCNTTCCACCCAATATTTNCCCNCCCACTCACTACNATANAC
    GCAGAAANCNCCGGCGNAAANGCCCACTATAAACAANNNTNGNTTNCAANAGANCCCGGG
    GGGGGGGTGNNCNTCCACATGGGNNGGCGNGNNCGCCCNNACCCNTCCNNNNTGTTTATA
    TTCTGGGNCGTGTGGGGNNGTCTTNNCAGGGNGNNCGNCGCTTNTTTCCNCAGAATCCCN
    TGAGAAAAACTCCGTGCNTCNNGGGNCGCCCNNCCCNGCTTNTCTAAATGGAGAANTCGG
    GCTCNNNANNCCTCCTGCGNANAAANAGACCNCGTTNATTTNTGGNANANATTTGGGGGG
    NGCTNCTTTCCGNACTTNACTNAGNNCTATNANGGAAATACNCNT
  • Synonyms
    GUDMAP:5569 probe, maprobe:289
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Bmal2 basic helix-loop-helix ARNT like 2
Expression
  • Assay Results
    45
Sequences
AY005163 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory