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MTF#526 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#526
  • Sequence Type
    cDNA
  • ID
    MGI:3506246
  • Region Covered
    Nucleotides 199-920 of GenBank Accession ID AK004596.
  • Vector Type
    Plasmid
  • Insert Site
    XbaI/XhoI
  • Insert Size
    0.721kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers TGCTCTAGAGGTTAACACACCCCGAGGGTCC and CCGCTCGAGCACGTCAACCTCCAGCTTCTCC. Template sequence provided by Paul Gray:
    GACGTCACCTCCAGCTTCTCCACTGCTGTGCNCATGCTCTCCACGTGCTTCTGTAGGGCT
    GCGTTCCTCTCTTCAAACTCCATGTTGGATTTACGAAGCTGGCGGAGCTCTGCCTCACGA
    GCTTTGCTGTGGTTCAGGAATTCTTCGGTAAATATAGGGATATCAAAAACAGAGCGTTCC
    TTTACCTCTGTTTCTTTCTCATGATCATGAGTGGCCTGTCGGGCTGCATNTTGCCTATGA
    GATTTGCCTTTCTGACGGTCCTGTGTTTTCCTACTGAAGACCTTGTAGGCCTCGGTCTTC
    TGATACTGCTCCAGTTCCTTCATGTAACGCTCCTTATCTCTGTCTGCTTCATCAAGGTAG
    CGCTGCTTTTCCTCAGGAGGCAGTTTACTCCACTCATTGCCCAACATCCTTGTGATTTCT
    GGAAATGGAACCTCTGGTCTCTTTGCTCGAAGCTGTTCTCCACGCTCGTTCATGAATCGA
    ACATATCCTGTAAGGGGGGATTTAGGTGCATTGCTGTCTCGAAGAGGTTTCTTCCTTTTT
    CTCCCTTTGGACCAACCTCCTCGTTTACTTCTTTGCTCATCTTCAGGCCTTTGCTCATTG
    CCTTCTACAGCATTGGAAGCCTCACTCTGAAGCAGCTGGNCTTGGGAGAGATCCTCCACA
    AACTCTGGGTTGGTTGNTGATGTGGCTGCACTGCCATACGGACCCTCNGGGGGGGTTAAC
    CTCTAGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTTGNTCCCTTTANTGAGGGTAAN
    TTCNAGCTTGGCGNATCATGGGCATAGCTGTTTCCTGGGTGAAATNNNATCCCCTCCCAA
    TTCCCACAAAATANNANCCGNAGCATAAAGGGNAANCCCGGGGTGCCCNAAGAGGGANTN
    ACTCCCATTAATTGNGNTGGGNTCCNGGCCGCTTTCNGTCGGNAAACTGTCGGGCACCTN
    ATAATGANCNNCAACCCNCGGGGAAANGGGNTTGCGNATTGGGGCNCTNCCNNTNCCNC
  • Synonyms
    GUDMAP:5562 probe, maprobe:284
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Hmg20a high mobility group 20A
Expression
  • Assay Results
    48
Sequences
AK004596 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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06/04/2024
MGI 6.13 		The Jackson Laboratory