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MTF#510 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#510
  • Sequence Type
    cDNA
  • ID
    MGI:3506240
  • Region Covered
    Nucleotides 241-970 of GenBank Accession ID AF421878.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.729kb
  • Note
    Fragment was generated by PCR with primers CCGGAATTCCTGAAGGGCTACGACTGGACG and either CCCAAGCTTTGCTGCTGATGCCGTAACTGC or CGATGTTAATACGACTCACTATAGGGCCCAAGCTTTGCTGCTGATGCCGTAACTGC. Template sequence provided by Paul Gray:
    GGGCCCCCCCTCGAGGTCGACGGTATCGATAAGCTTTGCTGCTGATGCCGTAACTGCCAG
    TGTAGGTGACCTGGCCGTGGGTGGCCGGAACCCCTGGGTGGCCGTTGGGTGGCAAGTATT
    GGTCAAACTCATTGACGTCGAAGGTCTCAATGTTGGAGATGACGTCGCTGCTCAGTTCAC
    CGATGTCCACGTCGCGGAAGTCGATGGGGGGCTGTCTGCCCCCCTCTGCCAGAGGGCGCC
    CCTCTCGCTTCAGATCAACTTTGCCAGCTTGCACGTCGGTTTTGGGAGTGGTGGGTGTGG
    TCGGCGGACCCTGAGATTGCCCAGAGTGCTCGCCCGGGGAGTGCACCTCACTCATGCCGG
    AGGAGGAATGTGGGGAGTCGGCTTGCAGCGCCTTGAAGATAGCATTAGGAGAGATGTGAG
    TCTGTTCCGTGGCCTCTTCGGCCTCCGCTTGTCCGTTCTTCACCGACTTCCTCCGCCGGG
    GCTGGTACTTGTAATCGGGGTGGTCTTTCTTGTGCTGCACGCGCAGCCGCTCCGCCTCCT
    CCACGAAGGGTCTCTTCTCGCTCTCGTTCAGCAGCCTCCAGAGCTTGCCCAGAGTCTTGC
    TGAGCTCCGCGTTGTGCAGATGCGGGTACTGGTCTGCCAGCTTCCTGCGCGCAGCCTGCG
    CCCACACCATGAAGGCGTTCATGGGTCGCTTGACGTGTGGCTTGTTCTTGCTGGAGCCGT
    TGACGCGCACGGGCATGGGCACCAGCGTCCAGTCGTAGCCCTTCAGGAATTCCTGCAGCC
    CGGGGGATCCACTAGTTCTAGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTTGTTCCC
    TTTAGTGAGGGTAANTTCGAGCTTGGCGTATCATGGTCATAGCTGNTTCCTGTGTGAAAT
    TGTTATCCGCTCACAATTCNCACAACATACGAGCCGGAANCATAAGTGNAAAGCCTGGGG
    NGNCNNATGANNGAGCTANCTCCNNTNATTGNGNTGCGCTCNCTGNCCGCTTTCCAGTCG
    GGAAACTGTCNNGCNNCTGCATNATGANCGNCCNCCCCCGGGNAANGCGGTTGCNNATNG
    GGGCTNTTCNCTTCCCNCTNAGAAANCCTGCCCCGGGCTTNGGNTGGGGNAGG
  • Synonyms
    GUDMAP:5547 probe, GUDMAP:12833 probe, GUDMAP:12834 probe, GUDMAP:20765 probe, GUDMAP:20766 probe, GUDMAP:20767 probe, GUDMAP:20768 probe, maprobe:279, maprobe:8691
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Sox9 SRY (sex determining region Y)-box 9
Expression
  • Assay Results
    217
Sequences
AF421878 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:152838 Fu H, et al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development. J Neurosci. 2009 Sep 9;29(36):11399-408
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:186535 Herriges JC, et al., Genome-scale study of transcription factor expression in the branching mouse lung. Dev Dyn. 2012 Sep;241(9):1432-53
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory