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MTF#509 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#509
  • Sequence Type
    cDNA
  • ID
    MGI:3506239
  • Region Covered
    Nucleotides 159-862 of GenBank Accession ID AB023419.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.703kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCGGAATTCGGGGACAAGAGTTCGGAAAGCC and CCCAAGCTTGGGGGACATCCAGAAACAGAGG. Template sequence provided by Paul Gray:
    GCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTCCCAAGCTTGGGGGA
    CATCCAGAAACAGAGGACATCATAGAAACCCCTGGGGATTGGCCAAGGGCTAAAGAACCT
    AGAGGGTGGCTGCAGTGGAGGGGACTAGGTGTGAACTCCGGTGAGTAAGGGGGCCCTGGT
    AGATGGGGGAGGTGATGGGGGTGACCATGCTCCTCCTGACATGAGGACGAGAAGAAGGTC
    TGCTCTGGCTCCAGCGCATCCAGGGGCGACATCTCCGGAGGTGTGGGCAGCCCGTAGGGA
    TACGTGTCCACACTGCCAGGGGCAGCAGCTGCACCTTCGCGGTAGCAGCTGTGCAGTCCA
    GGCAAGGTAGCCCCTGGGGAGTACTCACCCCTGTCCTCCTTCTCCCCCCTGCCAATGCCG
    TTTTTCTCAGGCAGCGTGTTCTGGTCACGAGAGAGGGAGCTGAGGAGGAAGCCAGGGTCC
    ACGCGCTTGCAGAGGCGCTTGCCTTGTTTCTTCCTGCGGGGCCGGTACTTGTAGTTGGGG
    TAATCCTGCATGTGCTGCAGGCGCAGCCGCTCTGCCTCATCCACATAGGGTCTCTTCTGG
    GACAGTGTCAGCGCCTTCCATGACTTTCCCAGCATAAGCCGAATTCCAGCACACTGGGCG
    GCCCGTTACTAGTGGATCCGAGCTCGGTACCAAGCTTGATGCATAGCTTGAGTATNCTAT
    AGTGTCCACCTTAAATAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTGTGTGNAATTG
    TTATCCGCTCACAATTCCACACCAACANACGAGCCCGAAANATAAAAGTGTAAAGCCTGG
    GGTGNCTAATTGGGTGAGCTAACTCCCATTAATTGCGTTGCGCTTCNNTGCCCNGCTTTT
    CCANTCNGGGAAACCTGTCCTGGCCNCCCTGCATTNATTGAATCNGCCNACCCCCCGGGG
    AAAAAGGCGGTTTTNNCGAATTTGGGGGCTTTTTTCCGNTTTCTCCCTTAANATANATTC
    GTCTGNNCTTCGGNCNTTCNCGGGNGGNGGAGAGNGGGTTTTANANTNC
  • Synonyms
    GUDMAP:5546 probe, GUDMAP:12831 probe, GUDMAP:12832 probe, maprobe:278
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Sox7 SRY (sex determining region Y)-box 7
Expression
  • Assay Results
    80
Sequences
AB023419 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:186535 Herriges JC, et al., Genome-scale study of transcription factor expression in the branching mouse lung. Dev Dyn. 2012 Sep;241(9):1432-53
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory