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MTF#477 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#477
  • Sequence Type
    cDNA
  • ID
    MGI:3506212
  • Region Covered
    Nucleotides 130-864 of GenBank Accession ID AJ223233.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.734kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCGGAATTCGAGAATCAGAGCAGTAGCTCGG and CCCAAGCTTTGGCTCCTGCTTCACAATGGGG. Template sequence provided by Paul Gray:
    CTCGAGGTCGACGGTATCGATAAGCTTTGGCTCCTGCTTCACAATGGGGGAGACGATGGC
    AGGGTGGGGGATTCCTGAGGTGGGCAGACCAGGATGGGCAGGAGCCACCATGTGTGGGAA
    CCGGCTTGAGACCAGGCTGGACATTGAAGCGTTCATGGCGAGGGCAGGGTAAGGATGCCG
    GAAACCACCCGGAGGGAGAGAGTACATGGGCTGCCCTCGCTGTGGGACGAGCCAGCCGAG
    GGGATGGGGGATTTGTCCGACAGCTCCTGGAGACAGTGGGTAATACGGTGACAGCTCAGA
    TGGATGAGGGGGCCGGGGGATTCCTGTCTTTGGGTCGATCTCTGGGGACAGATGCGTGGG
    AGGGGACGCAGGGGAGAAGTGGTCGTTGCTGTAGGTGATGAGAGGTGTCAGCGGGTGCAT
    GTGATGAGGGTGCTGAACAACAGGAACTTTGTTGGACAAGTGTGCTGGAGATGGCGACCT
    TGTGTCCTTGACTGTAGCACTGGAGGGGACATCGAGGAGGGGCCATTTCATCTGTAGGTA
    GGTGCGCGCTCCACCAGGAGACAGGGGTCCGTTGGAGAGGTACGGGCTGCTCAGGTCTGG
    AATCATCAGGAAGGGGTACCCAGGATACGCAGGTCCCTTAAAAAAAGCGCCATCCTGGGG
    CCTTCTCACTTCGGCGAAATAGTCGCGCGGCTTCTGGAAAGCGTCCCGGGCGGGCTGCGG
    GCGCCTCTCCGCCTCGGAGTCCGAGCTACTGCTCTGATTCTCGANTNCCTGCAGCCCGGG
    GGATCCACTAGTTCTAGAGCGGCCGCCACCGCGGTGGAGCTCCANCTTTTGTNCCNTTTA
    GTGNGGGTTAATTTCNAGCTNGGNGTAATCATGGTCATAGCTGTTTCCTGTGTGAANTTN
    TTTCCCCTCCCANTNCNCCCAAATACNAGCCGGAAGCTAAAGTGTAAAGCNTGGGGNGCC
    TAATGANNGANCTANCNCCNTTATTGCGNTGCCC
  • Synonyms
    GUDMAP:5531 probe, GUDMAP:7656 probe, maprobe:262
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Tcf7l1 transcription factor 7 like 1 (T cell specific, HMG box)
Expression
  • Assay Results
    29
Sequences
AJ223233 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:152838 Fu H, et al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development. J Neurosci. 2009 Sep 9;29(36):11399-408
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory