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MTF#415 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#415
  • Sequence Type
    cDNA
  • ID
    MGI:3506191
  • Region Covered
    Nucleotides 399-1126 of GenBank Accession ID AB019436.
  • Vector Type
    Plasmid
  • Insert Site
    XbaI/XhoI
  • Insert Size
    0.727kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers TGCTCTAGACCGGTTGCCTGCTACTGTTCCC and CCGCTCGAGATAGCTGTGGGGCTTGAGCAGC. Template sequence provided by Paul Gray:
    GATGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGCCCTTCCGCTCGAGAT
    AGCTGTGGGGCTTGAGCAGCAGTTCTTTCAGGAACTGCCACAGGTGAATGGGCTGCCCGG
    AGCACGACGAGTCCACCTCACCATCCGTCCAGCCCTCCTCGCTGGTGGAGGCGCAGTAGT
    GAAGGGTCCCAGGCGAGGTCCTCTCCTTCATCCAGGCCGCTGACTTCCAGATGTCCAGGT
    GGGCATGCAGTACATCCCCACCCAAGGGTGCACGCTGACGGAACTGTTCCTCGGACATGG
    CGCACAGCTCCTTACCGCCCAGCTCCTGGAAGGCCTTGCCTGCTGGAGGCAGCCGGTACT
    GGTGTTCTGTCCATAAAAGCCACTTCTGCACGTTACCAGGGCTCCAGTCCCCAGGGTCTG
    CTGTGATGTTCAGAAGCTTGCAGGCCGTCTCAATATCTTTCAGGACCTCGCCCACAACCA
    TCGATTGCACCTGCTCTAGCGAGTGCTCATCCAACGTGCTCCCAGAGGCCTGGCTGTCAA
    TGACGGGACACTGCTCGGGCTCCTCCGGGTGGTCCTCCCCGGCACGGGCCTCGGGGACTT
    TGGCGACCCAGCTGCTATCGTCGGGATACATGTTAAAGTAAGAGAGGTAGAAAGCAGACA
    GGCCCTGCTCAGGGGTGGCGGGTGGACTANGACTCCATTCCTGCTTCTCAGGGGCCATTG
    CTCCTGATGCTGCCTTCTCCGTCCTGTTCGTGGTGCCACATCTGGGAAAAGTAGCAGGCA
    ACCNGGTCTAGAGCAAAGGNNGAATTCCAGCAAACTGGCGGCCGTTACTAGTGGATCCGA
    GCTCGGTACCAAGCTTGATGCATAGCTTGAGTATTNTATANTGGNCACCTAAANAGCTTG
    GGNGTAATCNNNGGGCAAAGCTGNTTNCCTGTGGGGAAATTGNTATCCGCTCNAATTNCC
    CNAAAATACGANCCGGAANCATAAAGGGTAAAGCCTGGGGNGCCTANNGAGNGANCTAAC
    TCCNATTNATTGNG
  • Synonyms
    GUDMAP:5490 probe, maprobe:247
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Spdef SAM pointed domain containing ets transcription factor
Expression
  • Assay Results
    49
Sequences
AB019436 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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05/14/2024
MGI 6.23 		The Jackson Laboratory