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MTF#389 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#389
  • Sequence Type
    cDNA
  • ID
    MGI:3506173
  • Region Covered
    Nucleotides 131-872 of GenBank Accession ID AF049702.
  • Vector Type
    Plasmid
  • Insert Site
    XbaI/XhoI
  • Insert Size
    0.741kb
  • Note
    Fragment was generated by PCR with primers TGCTCTAGAAACCCATAGACCTTCCTGCCC and CCGCTCGAGTTTCTCTTCCTGCCACCCGTGC. However, the 5' primer does not match the reported gene. Template sequence provided by Paul Gray:
    GNTGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAAACCCATAGAC
    CTTCCTGCCCAACGCATCCTTCTGTGACCCCCTGATGCCTTGGACCGATCTGTTCAGCAA
    TGAAGACTACTACCCTGCCTTTGAGCATCAGACAGCCTGTGATTCCTACTGGACATCAGT
    GCACCCTGAATACTGGACCAAGCGCCATGTCTGGGAATGGCTCCAATTCTGCTGCGACCA
    GTACAAGCTTGATGCCAACTGCATCTCCTTCTGTCACTTCAACATCAGCGGCCTGCAGCT
    CTGCAGCATGACGCAGGAGGAGTTCATTGAGGCAGCCGGCATCTGTGGGGAGTACCTGTA
    CTTCATTCTCCAGAACATTCGCTCGCAAGGTTACTCCTTTTTCAATGATGCTGAAGAGAC
    CAAGACTGGCATCAAAGACTATGCTGATTCCAGTTGCTTGAAAACAAGTGGCATCAAGAG
    TCAAGACTGTCACAGCCGAACAAGCCTCCAAAGTTCTCACCTGTGGGAATTTGTCAGAGA
    CTTGCTGCTGTCCCCTGAAGAGAACTGTGGCATCCTGGAATGGGAAGACAGGGGAGCAGG
    GCATTTTCCGAGTGGTTAAGTCAGAAGCCCTGGCAAAGATGTGGGGACAAAGGAAGAAGA
    ATGACAGGATGACGTACGAGAAGCTGAGCCGAGCCCTGAGATACTACTATAAAACGGGAA
    TTCTGGAGCGGGTTGACCGGNAGTTAGTGTACAAATTTTGGAAAGAACGCGCACGGGTGG
    CAGGAAGAGAAGCTCGAGCGGAAGCCGAATTCCAGCACACTGGCGGCCGTTTACTAGTGG
    ATCCGAGCTCGGTACNAGCTTGATGCATAGCTTGAGTATCCTATAGNGNCACCTAAATAG
    CTNGGCGTAATCATGGGCANANCTNNTTCCTNGGGGAAATTGTTTNCCGCNCCNAATTCC
    CNNAANNACCNNNCCGGAAACNTAAGNGNAAAANCNGGGGGNGCNNAAGGGNGAGCTAAC
    CCCCNTTN
  • Synonyms
    GUDMAP:5475 probe, GUDMAP:12821 probe, GUDMAP:12822 probe, maprobe:230
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Elf5 E74-like factor 5
Expression
  • Assay Results
    77
Sequences
AF049702 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:186535 Herriges JC, et al., Genome-scale study of transcription factor expression in the branching mouse lung. Dev Dyn. 2012 Sep;241(9):1432-53
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory