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MTF#380 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#380
  • Sequence Type
    cDNA
  • ID
    MGI:3506166
  • Region Covered
    Nucleotides 672-1461 of GenBank Accession ID AF001465.
  • Vector Type
    Plasmid
  • Insert Site
    Bam/HindIII
  • Insert Size
    0.789kb
  • Note
    Fragment was generated by PCR with primers CGCGGATCCACCCGTGGGCATGGACAACAGC and CCCAAGCTTGAAAGCAGGGACATGGCCAGG. Paul Gray provided two sequence files for this probe. Sequence 1:
    GGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTCCCAAGCTTGAAGCAGGGACATG
    GCCAGGGCCCCAGGGAGGGGGATGACATCAGGAGTTGCAGGAGGGGTTCTGTCATGTGGC
    CCAAGAGATGGCTGCACTGTGCTCCTTGGCCTTCATGCGCAAGGCAGCGATGCTTGAGGT
    CTTGCGGTCTGGCTCGCCGTTCATCTCGTAGACATTGAGGCCCGGACTGATGCCAGCTGC
    TCCAAACAGGCTGCCCATGTGTGTCTGGCCCACGTGACTGCCAGCTCCAGAGACACTCAA
    GAAGTCGGAGACGCTGCTGGCCCCGGAGCCAGGAGGGTGAGCGTGAGGGGACATACAGGC
    TGGTACCGGGTCACAGGGGACCACACAGGCTGGCACTGGCGAGGCAGCCCCATTGTTGCC
    AATCCAGGATGGGTTCTGAATCTGGGCGTAGTTCTCAGCCCGGGTGAGGAGGGGCAACTC
    ATAGGCCGTGGAGAAGTGGGTCCGGACCTGCTGCATCTGCCCAAAGCGCTCCCTCTTTCG
    CCACTTGGCCCTCCGGTTCTGGAACCAAACCTGCACACGGGCCTCGGTGAGGTCGGTCCT
    CATAGCCAGCTGCTCCCGTGCATACACATCANGGTAGTGTGTCTTCTGGAAGACTTTCTC
    CAGCTCTTCCAGCTGGTAGCTAGTGAANGTGGTTCGGTTCCGCCGCTTCTTGCCTTTGTT
    ACTCTCAGAATCGGTCTTTTTCCAGGGGGCTTGGTATTTCAGCGCTGGCCCGGTCCTGGN
    GCCCCTTTGGNCCCTGCCTCCTTCACACTGANGTAGCTGTTGTCCATGCCCNCGGGTGGA
    TCCCNNANCCGAATNCNGCAACTGGCGGCNNTACTAANNGAATCCNACCNGGTACAAGCT
    NGAGGCCAACNTGANNNTTNANANNGNCCCNAANAACNTGGNGNAACCGGGCNNAACCNG
    TTCCCGGTNGAATNGTATCCNCNCAATTCCCCAAATNNANACCGAAACAAAAGNTAAAACCGGGGGNCNAAAAAGNCAAACCCNTTANTGGN Sequence 2:
    TCGAGAACGCTGAGACTTGCGTCTCTTACTGCGAGTCCCCGGCCGCTGCCATGGACGCCT
    ACTACAGCCCGGTGTCGCAGAGCCGGGAAGGTTCGTCGCCTTTTAGGGGATTCCCAGGAG
    GCGACAAGTTCGGTACAACTTTTCTGTCGGCCGGGGCCAAAGGACAGGGATTCGGGGACG
    CCAAGAGCCGGGCCCGCTACGGCGCGGGGCAGCAGGACCTGGCGGCACCGCTGGAGAGCA
    GCTCCGGGGCGCGGGGATCCTTTAACAAGTTCCAGCCGCAGCCGCCCACCCCACAGCCGC
    CGCCCGCTCCACCCGCGCCGCCTGCGCATCTCTACTTGCAGAGGGGCGCCTGCAAAACGC
    CCCCGGACGGTAGCCTCAAGCTCCAGGAGGGCAGCGGCGGCCACAACGCGGCCTTGCAGG
    TCCCCTGCTACGCCAAAGAGAGCAACCTGGGTGAGCCAGAGTTGCCTCCTGACTCTGAAC
    CCGTGGGCATGGACAACAGCTACCTCAGTGTGAAGGAGACAGGGGCCAAGGGGCCCCAGG
    ACCGGGCCAGTGCTGAAATACCAAGCCCCCTGGAAAAGACCGATTCTGAGAGTAACAAAG
    GCAAGAAGCGGCGGAACCGAACCACCTTCACTAGCTACCAGCTGGAAGAGCTGGAGAAAG
    TCTTCCAGAAGACACACTACAAGCTTGATATCGAATTCCTGCAGCCCGGGGGATCCACTA
    GTTCTAGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTTGTTCCCCTTTTAGTGAGGGT
    TAATTTCGAGCTTGGCGTAATCATGGTCATAGCTGNTTCCTGTGTGAAATTGTTATCCGC
    TCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGNGCCTAAT
    GAGTGAGCTAACTCCCATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACT
    TGTCNTGNCAGCT
  • Synonyms
    GUDMAP:5468 probe, maprobe:225
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Alx4 aristaless-like homeobox 4
Expression
  • Assay Results
    14
Sequences
AF001465 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory