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MTF#346 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#346
  • Sequence Type
    cDNA
  • ID
    MGI:3506164
  • Region Covered
    Nucleotides 1081-1780 of GenBank Accession ID U63386.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.7kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCGGAATTCACCTGACTCGGACAGCCACACC and CCCAACGTTGCCTGTGATGAAGGTGGCGAGG. Template sequence provided by Paul Gray:
    GNATGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTCCCAACGTTGC
    CTGTGATGAAGGTGGCGAGGAGGCCAGATGAGCCTGGCCAGGCTGGACTGCTCCTGTTAT
    TCCACGGGGAGTAGGTACAGCAGCAGCCAGCTGTGCTAATCCCAAAGCCTGTGCTTGGGC
    TGAACCTGGCTGCCGGGTACCGACAACTTGCACGGGGATATGTGGTGGTGGCTGCTGTGT
    AGCTGACATCTTAGCAGCTCCTAGTTGAGGAGGTTTGATAGGCGCTACAGGAGGCTTGGA
    CTGAATGGGGATGGGTGGTTTAGAGGTTGGTTCAGGTGGAAGAGTCAGGGGTGAAGACTG
    AAGCATGGGTTGGACCACCANAGTCTGGGCTTGCTGTTGTGATTGGGAAGGTGGGACCTG
    CTGAGTANGTGGGACCTGGGGTGGCTGANGGGCANTGAGGGTTGTTCCTCNCTGCTGCTG
    CTGCTGCTGNTGCTGTTGTTGCTGCTGNTGCTGCTGNNGNTGCTGCTGCTGCTGNNCCNN
    NTGNNANGTCTGNGNNTGCNTNAANCANCNGGCANTGGCGNTNNNGNAACTGNTGCTGNC
    NNGNNCATGGCNNNCCTGNNGNTGGNACCCCACNTGNATCTNGCTGGNNNANNANCNNCN
    NNNNNCGCTNANNCCCNNANGANCNNGNACNNATNNNNATGCNNNNAAACCAANNAACCC
    CCCCNNCNNNNNNNCNNNTNANNTTNCCCNCNNNNGCCNNTTNCCCAANTNNNANNNNTN
    CCCCCNNNNNNCNNTNCTNNNNGATCCNNNCCCCNNCNANCNNNANNNTANNNNNNNAAN
    CNCNANNNNCNNNNANNNNNNNCNNNNNANNNNNCANNCNANCCCCNNANNNNGNNNNNN
    NNNNNCCNNACCNCNNCNNANNNAANNNNAANNCANNNNCANAATNCNANAANCNTTNNC
    NNNCCCTNNNACGNNCCCCNNACCCNCCCCCTNACNNAACATANCCNAACCNCCCCCNNA
    ACNCCNATNNNNNANNANNTCNNNNACCCCCACNAAATTNNA
  • Synonyms
    GUDMAP:5440 probe, maprobe:215
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Phc1 polyhomeotic 1
Expression
  • Assay Results
    53
Sequences
U63386 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory