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MTF#329 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#329
  • Sequence Type
    cDNA
  • ID
    MGI:3506158
  • Region Covered
    Nucleotides 192-921 of GenBank Accession ID AF061576.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.729kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCGGAATTCTCAGTGCCATGAATCCCCAAGG and CCCAAGCTTTCCAGGATCTCCGAGCGCATGC. Template sequence provided by Paul Gray:
    GCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTCTCCGAGCGCATGCT
    GTCTTCAGACAGGTCGCCATCTTCATCATTTTCGGAGTCTGTGCTGTCATAGACCTGGTA
    GAACTTCTCCTGCAGCTGGCGCAGCTGCTTCTGCATGTCTTCCAGCTGCTGGGGCAGCTT
    CTGCTTGCGTTTGTTTTCTCTGTAACTTTCTCGGGGACTCACAGACTGCGGGGCCATCTC
    TCTTTCGTTTTCATTGCCCCTTAATGCCACACTGGGGGAATGGCTCATACCCCGAATGAT
    ATTCTCAACCCGGGCGCGCTTTGCTCTCAGGTGCTCATCACATAAGCGATCCACATCAAA
    CTGGCTCATAGTAGGCCTGCCAAAAGGGGAAAGACACTCTGGGGGGCTGTCTCTTGAAGA
    GTTGCTACATATATCCTCCTGATGTACTTCGGAGCCTGTGCTAGAGAGTCCGCTGGCTTG
    GAAACTGGGCTCGGTGCCACCGTTTTTGTTCATGTTATTTTTCAACAGCTGGGAAATTAT
    AGTTGCTCCTGGAAAAGGCATCATGGCATCTTCATACGAGTTCGCCCTCTTCAGCAGCTT
    GCGGAGTACGTTCGACTTTTCCCCATCTGCGTGTTGCACCACAGAATATTCAACATCCTG
    CTCTGAACCTTGGGGATTCATGGCACTGAGAATTCCGGNAAGCCGAATTCCAGCACACTG
    GCGGCCGTTACTAGTGGATCCGAGCTCGGTACCAAGCTTGATGCATAGCTTGAGTATTCT
    ATAGTGTCACCTAAATAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTG
    NTATCCGCTCACAATTCCNACAACATACGAGCCGGAAGCATAANTGNAAAGCCTGGGGNG
    NCTAATGAGTGAGCTAACTCCNATNANTGGGTTGGGCTCACTGNCCGCTTTCCAGTCGGG
    NAANCTGTCNNGCCCCCTGCATTNATGAATCCNCCCCCCCCCNGGGNNAANGNGGTTNGC
    NAATTGGGGGGCTNTTCCNNTTNNNCGCTCAAGAATCCCTGGCCTCGGGCGTTCGGGNGG
    GGGGANGGGNNACNCTCNCCCAANGGGGNAAACGGNT
  • Synonyms
    GUDMAP:5420 probe, maprobe:209
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Prox1 prospero homeobox 1
Expression
  • Assay Results
    58
Sequences
AF061576 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory