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MTF#297 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#297
  • Sequence Type
    cDNA
  • ID
    MGI:3506142
  • Region Covered
    Nucleotides 219-912 of GenBank Accession ID M26283.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/XbaI
  • Insert Size
    0.693kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CGCGGATCCCATGCACACCGGCTCTTACGGC and TGCTCTAGATCAAGGTTGGAAGGCGCTGCCG. Template sequence provided by Paul Gray:
    GCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTTGCTCTAGATCAAGG
    TTGGAAGGCGCTGCCGGCTGTAGCCAGACTCATACTTTTCAGTTTGTTGTCTTTCTTCCA
    CTTCATGCGACGGTTCTGGAACCAGATTTTGATCTGACGCTCGGACAGGCAAAGCGCGTG
    GGCGATCTCGATACGTCGCCGCCGGGTCAGGTAGCGATTGAAGTGGAATTCCTTTTCCAG
    CTCCAGGGTCTGGTAGCGAGTATAGGCGGTCCGGGCCCTTTTTCCGTCTGGCCCAGTCAT
    ATCGTGGCTGATGTGAAGCTTCCTCATCCAGGGGAATATCTGTGGAGTCTGCCCCTCGGG
    CGCGGCCGTAGAGGTGGCCATGGGCTCTGGCTGTGCTCGAGCCAAGCTGGGGCTGCTTAG
    CTGGCTCGCCGCTTCCTCGGGCTCAGAGGACGCGCTGGCCTCGTCTATTTCGGTGAAATT
    GGCGCTGGAGCTGGCTGGTGTCGCCTGGTCGGAANGGGACGAAGCAGAAGGCTTGGCGCC
    GTGGCTGTCGCCGTTAGTGCANGGCAGGGACTCGGGCGAGGACANGGAGCANCTGGACGT
    CGCCTGCCTGAAGCGGGGGTTCCTGGGCGGACGCGGGGAAGGCGCGCGAGCTCTCGCCNA
    NCGNCCCNAAGTGGCTGGAGGAGGCCGAGNAGCGGTTGACGCTGANATCCATCCCATTGT
    TANTGTAGCCGTAAAACCCGGTGTGCATGGGATCAGGCCGAATCCAGCACCCTGGCGGCG
    NTCCTAGNGGATCCNANCTCGGTACNANCNTGATGCNANCTTGAGATTCTAAATGTCCCN
    AAATANTTGGGGAACNTGGCATANCTGTTCCTGNGGAATTGTNNCCCTANATTCCCCAAA
    TACNACCGNNCTTANGGGAAGCTGGGGGCNAAGNTNNCTACTCCATTATTGCTTNNCTCN
    TGCCGNTTCCNNNGNAACCNTCTGCCNCTNTTATNAACCNCNCCCCNGGAANGGGATGNN
    TTNGGGGCCTNCGTTCCCCCCNAAANCAGGCNGGGGTTNGNGGGNGAGGTTCCCCCCTNA
    GGGGAAN
  • Synonyms
    GUDMAP:5396 probe, maprobe:197
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Hoxb5 homeobox B5
Expression
  • Assay Results
    51
Sequences
M26283 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:186535 Herriges JC, et al., Genome-scale study of transcription factor expression in the branching mouse lung. Dev Dyn. 2012 Sep;241(9):1432-53
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory