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MTF#283 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#283
  • Sequence Type
    cDNA
  • ID
    MGI:3506136
  • Region Covered
    Nucleotides 171-976 of GenBank Accession ID AF226662.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.8kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCGGAATTCGCAATGCGTGCAGTGTGCCTCC and CCCAAGCTTTGTGATCTCCAGGCATCTGGGG. Template sequence provided by Paul Gray:
    TCGAGGTCGACGGTATCGATAAGCTTTGTGATCTCCAGGCATCTGGGGTGGGGTGAGACC
    CTGTCGGAAGGGATCAGAGTTGTAGACGCTCTGTTCAATGGCCAGCAGCTGCTGTGGGTG
    GGCAACGTTGTATANGGGTTCATGATCCCTTCCATGNCCGCATTCCCACTACCATTTGTC
    TGAACANAANTCANCCTCTGGGTGNTCTGNTGGTCCTGNTGCTGTTGCTGCTGTCNCCNG
    GCCANCTTCTTCATCTTGGCTCGCTGGNTCTGGAACCACACCTGAACCACACGGACACTC
    ANCCCTGTCTCCNCANCCAGANTCTCCCTCACCTTTCTGCANGGCTTGGANGANACTTCA
    AACNANGCCTTGAATGNTCTCCTCTGCTGANTGGTCANGANGGNTCTGGGANGTTTGGGT
    CNCTTANGGNCCTTGNCGTCCTCTGANGCTCCTTTTCCTGNCCCATGGGCTGANTTGNAA
    ANGNTCTCCTCATCATCNCTTTTGCCTGAATCTGAAGNCGCAAGGCTCACCAGGCTCAGC
    AGCTCCCGTTCTTTCTCATAGTCCCCTTTGCAGAGCAGCTGGCCCTCCTTCAGGACAAAC
    TCGTCNCCCTTCTGCAGCTGTCGCTCACAGACGCAGCAGCAGAAGCAGCTCAGGTGGTAT
    ACGCTCTTCTGGGCACGCATGACAAACTCATTGGGCGCAATGGCCTCGAAGCAGCCCCCA
    CATTTGACAGCAAACAGTTTCTCGTAGTGGTACTTGCAGTAGAGCTTCTTGTCCCGGTAG
    AANCAGGTGGTCCCNGGGCTCTNTGCGGGNAGGNACACTACACGCATTGTGNAANTCNGC
    ANNCCCGGGGNATACCCCAATTTCTAAAGAGGCCGCCACCCCNGNGGGNATCCNCCCTTT
    TNTTCCNTTNANGANGGGTNATTTNNNGNCTGGGGGNAAANANGGGCAAAACTGNTTCCC
    GGGGGAAAATGTTNTCCCCCCCNAATTCCCAAAACATAAAAACCGGAAANANAAAANTTA
    AAACCGNGGGGGNCCNANANGNGAGCCAACCCCCNTNATTNGGGGGGNCNNAAGCNNCTT
    TNAANNGGNAANNNTNTNG
  • Synonyms
    GUDMAP:5388 probe, maprobe:193
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Lmx1a LIM homeobox transcription factor 1 alpha
Expression
  • Assay Results
    48
Sequences
AF226662 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory