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MTF#279 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#279
  • Sequence Type
    cDNA
  • ID
    MGI:3506133
  • Region Covered
    Nucleotides 180-1028 of GenBank Accession ID AF113518.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.86kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCGGAATTCCGACAGGTACTATCTGCTGGCCG and CCCAAGCTTAAAGTGGTCGCAGTGCCGGGTGG. Template sequence provided by Paul Gray:
    TCGAGGTCGACGGTATCGATAAGCTTAAAGTGGTCGCATGCCGGGTGGAGTGAGAGCGCC
    GCTGTCTGCTGAGGGCGGGGCCGGAAGCGACGTGCCGTCAGCTTTATCAACACCCCCATT
    CTCCTGCCGCAAAAGGTTCCTTCTGAATTTGGCTCGTGCGTTTTGGAACCAAACCTGTAA
    AACTCTTTTGGTCAGGCCTGTTTTTTGAGCAAGCTGTTTGAGGTCCTTGGCATCTGGGTT
    ATGGTTGATAGCAAAGTAGGATTTCATGGTCCGGAGCTGGTGATGCTTGAAAGAAGTTCG
    CATCCGTTTGGTCTTCTGTGAAGGTGGATAAGGCTGCTGGTCCCGGTCCAAGTGGTCTGC
    CTCGTTCTCATTACAACCTGAGTTGTAATTCACGATGTCCACTCCCAGAGCTGGGCTCTT
    CCGCTTCCGGGGCCGCCCCTTCTGCACGGTGCCAGTGCCATTGAAGTAAGGCAAAGCCAA
    GCCGCCGCTCTTGGCCGCCAGCTCCGTGTAGCTCAGCTGAGGTGGATATTCCCCTTGCAA
    GAGGGTCTCGAAGTGTGCGCGGCAGTACACCAGGCTGTCCTTCATCCCGAAATGGTCGCC
    CGTGGTCAAGGTCTTGTTGCAAGTGGAACAAGTGAAGCAGCTCAGATGGTAGACAGAGTC
    TCGGGCGCGCATGACCATCTCAGANGCGGAAATGCCAAGGTGGCAGCGGGCACATCTCTG
    CACAGAGAACCTTCTGTAATAATCCTCCTTGCAGTAAATGCTACCGTCCTTGGCAAAGCA
    GGTGAGCTCAGATTCCAGAGCCAGCTTACATTCACAGCACTTCAGGCACCTAAGATGCCA
    CTGNTTTGTCTACNGNCAGCAGATAGTACCTGTCGGAANTCCTGCAGCCCNGGGGNACCN
    CTAGTTCTAGAGCGGNCGCCACCNCGGNGGAACTCCNGCTTTTGTTCCCTTTAGGGNGGG
    TAATTTCNAGCTNGGGGAATCATGGGCAAAGCTGGTTCCNGNGGGNAANTGTTNNCCCCT
    CAAANTCCCCCNAAAAACNANCCCGNAAACTAAANNGNAAANCCGGGGGGGNCNNANGNG
    GGANCCAACNCCNTTAATTGGGNTGGCCCCCNNGCCCNCTT
  • Synonyms
    GUDMAP:5387 probe, maprobe:192
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Lhx9 LIM homeobox protein 9
Expression
  • Assay Results
    57
Sequences
AF113518 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:171421 Vandunk C, et al., Development, maturation, and necessity of transcription factors in the mouse suprachiasmatic nucleus. J Neurosci. 2011 Apr 27;31(17):6457-67
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory