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MTF#277 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#277
  • Sequence Type
    cDNA
  • ID
    MGI:3506131
  • Region Covered
    Nucleotides 315-1034 of GenBank Accession ID AF124734.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.715kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCGGAATTCATGCCGTCCATCAGCAGTGACC and CCCAAGCTTCATTGTCCGAAGCTGGTGGTGC. Template sequence provided by Paul Gray:
    TCGACGGTATCGATAAGCTTCATTGTCCGAAGCTGGTGGTGCTTGAAGGAGGTGCGCATG
    CGCTTTGTCTTTTGGCTGCTGGGGTAGGGCTGGTCACGATCCAGGTGTTCAGCATCGTTC
    TCGTTACAGCTAAGCGCGGCGTTGTAAGCTGCCAGATCTGCCCCGGGTCCTGGACTCTTG
    CGCTTTCTCGGCCTCCCCTTTTGCACAGTGCCCACGCCGTTGTAGTAGGGAAGACCCAGC
    GGATTAGCCCCGGCTGAGCCCAATCCTGCACTCTTAGCTGCTGCGGCTGCGGCTGCCGCC
    GCTGCCACGTCGGCATGGTTAAAGTGTGCTGGGTATTCGCCCTGCAGCAGAGCCTCGAAG
    TGCAAGCGGCAATAGACCAGGCTGTCCTTCATGCCGAAATGGTCGCCGGTCGTCAGCATC
    TTGTTACACGTTGTGCATGTGAAGCAGTTGAGGTGATAAACCAAGTCCCGAGCGCGCATC
    ACCATCTCTGAGGCCGAGATGCCCAGGTGGCAGCGGGCGCAGCGCTGCACAGAGAACCGC
    CTGTAGTAGTCTTCTTTGCAGTAGATGCTGCCATCCTTGCTGAAGCAGGTGAGTTCCGAC
    TCCAGGTTGAGCTTGCATTCACAGCACTTGAGGCAGCGCATGTGCCATTGCTTGTCTACT
    GCCAGCAGGTAGTAGCCNGTCAGAGATCTTGCCCCCACAGCCAGCACACAACGCTGCCCC
    GGGTCACTGCTGATGGACGGCATGAATTCCCTGCATNCCGGNGGGATCCNCTAATTCTAG
    AGCGGCCGCCACCGCCGGTGGAGCTCCNGNTTTTCGTNCCCTTTNGAGAGGNTTAATTTC
    NAGCTTGGCGTAATNATGNNCATAGCTGNTTNCCNGGGNAAANTGNTANCCGCTCNCANT
    NCCCAAANCTACCAGCCGGNAATCNAAAATGNAAAACCTGGGGGGNCNTAAGGGGTNACC
    TACTCANTTANTTGGGTTGNGCTCNCTGNCCCCTTTCNGTNNGGAAACCNGNCAGCCCCC
    TGCATAATNANNTCCCANCCCCCGGAAAAGCGGTTGNCNNTNGGGCCTNTTCNNTTTCCC
    TNNNT
  • Synonyms
    GUDMAP:5386 probe, maprobe:191
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Lhx2 LIM homeobox protein 2
Expression
  • Assay Results
    56
Sequences
AF124734 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:152838 Fu H, et al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development. J Neurosci. 2009 Sep 9;29(36):11399-408
J:171421 Vandunk C, et al., Development, maturation, and necessity of transcription factors in the mouse suprachiasmatic nucleus. J Neurosci. 2011 Apr 27;31(17):6457-67
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
J:338811 Qu F, et al., Three-dimensional molecular architecture of mouse organogenesis. Nat Commun. 2023 Jul 31;14(1):4599
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory