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MTF#271 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#271
  • Sequence Type
    cDNA
  • ID
    MGI:3506125
  • Region Covered
    Nucleotides 261-990 of GenBank Accession ID X84000.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/XhoI
  • Insert Size
    0.73kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CGCGGATCCAACGCCATTCGGCTTCGCATCG and CCGCTCGAGCAGCTGGGAGACCATTCGGTGC. Template sequence provided by Paul Gray:
    GNTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGCCCTTCGCGGATCCAACGC
    CATTCGGCTTCGCATCGTGGAATTAGCCCAACTGGGCATCCGACCTTGTGACATCAGCCG
    CCAGCTACGGGTCTCGCACGGCTGCGTCAGCAAGATCCTGGCGCGCTACAACGAGACCGG
    TTCGATTTTGCCGGGAGCTATTGGGGGGAGCAAGCCCCGGGTCACCACCCCTACTGTGGT
    GAAACACATCCGGACTTACAAGCAGAGGGACCCAGGCATCTTCGCTTGGGAGATCCGGGA
    CCGCCTGCTGGCGGATGGCGTGTGCGACAAGTACAACGTGCCCTCGGTGAGTTCCATCAG
    CCGTATTCTGCGCAACAAGATCGGCAACTTGGCCCAGCAGGGTCATTACGACTCATACAA
    GCAGCACCAGCTCGCGCCGCAGCCCGCGCTGCCCTACAACCACATTTACTCATATCCCAG
    TCCCATCACGGCGGCAGCAGCTAAGGTGCCTACACCACCTGGGGTGCCGGCCATCCCCGG
    ATCGGTGGCCTTGCCGCGCACCTGGCCCTCCTCTCACTCCGTCACGGACATTCTGGGCAT
    CCGCTCCATCACCGACCAAGGAGTGAGCGACAGCTCCCCCTACCACAGCCCCAAGGTGGA
    GGAGTGGAGCAGCCTGGGCCGCAACAACTTCCCTGCCGCCGCCCCGCACGCAGTGAATGG
    ATTGGAGAAGGGAGCCTTGGAGCAGGAAGCCAAGTACGGGCAGGCACCGAATGGTCTCCC
    AGCTGCTCGAGCGGAANGGCGAANTCCAGCACACTGGGGGNCGTTACTAGTGGATCCGAG
    CTCGGTACCAAGCTTGATGCATAGCTNGAGTATTCTATAGNGNCNCCTAAAAAACNTGGG
    GGTAATCATGGGCATAGCTGNTTCCTGTGTGAAANTNGTNTCCGCTCNCAATTCACCCNA
    AATACGAGCCGGAAGCTAAAGNNTAAACCNGGGGGGNCCNATGAGGGANCTANNCCATTA
    ATNNGTNGGNCTCNNGNCCGCTTNCANTCGGGAAACTGNNNGNCACNTCNTTAAGAATCG
    CCCCCCCCNGGGGNANNGGGTTGGNATTGGGNCCNCNCNCTNCCCCCCNT
  • Synonyms
    GUDMAP:5381 probe, maprobe:186
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Pax9 paired box 9
Expression
  • Assay Results
    46
Sequences
X84000 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory