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MTF#256 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#256
  • Sequence Type
    cDNA
  • ID
    MGI:3506114
  • Region Covered
    Nucleotides 191-925 of GenBank Accession ID AJ237590.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/HindIII
  • Insert Size
    0.734kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CGCGGATCCTCTGGAGACCAGTACCTCGCGG and CCCAAGCTTAGTCCGTGGATGAGGATGCGGG. Template sequence provided by Paul Gray:
    TCGAGGTCGACGGTATCGATAAGCTTAGTCCGTGGATGAGGATGCGGGGCACCAGAGGTC
    TCTGAAGGGCAGGAGGTGGCGCGCTGGGTCCGCGGTACAGATAGAGTGCGGCACCGGGGT
    CCAGATTGGAAACCAGACTCTGCGGGTAGAAATAAGGCGACGGGAACATTCTCTGGAGCG
    CCGAGTAATTGCCTGCCTCCGCTAGCAGCTCCAGCCCCACGGCCGTCTGTCGCTTCCATT
    TAGTCCTGCGGTTCTGGTACCAGGTCTTGACCTGCGTGTCGGTGAGGTTGAGCGAGGCGG
    CTAGCTCCATGCGGTCTTGCACGCTCAGGTATTTCTGCCGCTCGAAGCTACGCTCCAGCT
    GCGCCAGCTGATGGTCGGTGAAGGCGGTGCGTGCTTTGCGTGGCTTTTTCAGGCGCACCG
    GGGGACTGTCCCGAGAGCTGGAGATCTCGCGGTCGCCCTCCTCCTTCACTTTGTACTCAG
    AGTCTGATGAAGCGCTGCTGACACTTTTGTCCAGCTTGTCTCGAAAGTCCTCCCCGGCCT
    TGGCCGCAAGGCGGCCCCCAGGCTCAGGGGCTGCAGGCTGCCCACTGCTAGAGTAGGGTG
    CACAGGCCGCGAGAGGTTTGCAGTCAGCAAGGATGTCCCTGATCAGAAAGGAGGAGGTGA
    CAGTTCGCGACTGGGCTGGGGCTGAAAGCTGCCCCCGGTTGCAGGTGAGAGTCCAAACCT
    GGGGCCAGATGCTGCACCAGGCCGCGAGGTACTGGTCTCCNAAAGGATCCACCAGGTTCT
    AGAGCGGCCGCCACCGCGGGGGGAGCTNCNAGCTTTTTGGTCCCCTTTAGTGAGGGGTAA
    TTTNCNAGCNTNGGCGTAATCATGGNCATAGCTGGTTCCNGGGTGAAATTGTTTTCCCCT
    CCAANTTNCCNANCAATACGNNGCCGGAACAAAAAGGNAAAACCCGGGGNGNCCTANTGA
    NTGGAGCTAACCCCNTTNATTTGGGNGGNGCTNNNGGCCGCNTTTCNTANNGGAAANCTG
    TTCNNGCCACCTNATTTTAGAATCCGCCCNACCCCCGGGGAAAANGCGGTTTGGGNTATN
    GGGGGCTTTNCCNCTTCNCNCCNCANNAGAATTCTNGGCTCNGGGCNTTCGGGGNGGNGG
    NNGGGANNTNN
  • Synonyms
    GUDMAP:5372 probe, maprobe:177
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Barhl1 BarH like homeobox 1
Expression
  • Assay Results
    63
Sequences
AJ237590 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory