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MTF#248 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#248
  • Sequence Type
    cDNA
  • ID
    MGI:3506106
  • Region Covered
    Nucleotides 342-1008 of GenBank Accession ID X59251.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/HindIII
  • Insert Size
    0.666kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CGCGGATCCCATGGCCGATCACAGGAAGCCC and CCCAAGCTTATGCTGTAGCCTACATGGGCGG. Template sequence provided by Paul Gray:
    TGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTNCCNAAGANTTATGC
    TGTATCCTNCATGGGCGGTGTANCAGNCNNNCNGNACGACTACAGGCNATNACGGCAGCG
    AATAGGAACANGNNGCAGCAGAGACACGTGCNACAGTAGAGGCNCCCANCNGCTGNAANN
    ACCGNTNNNTGACCGTTNAANCAGGTAAAAGAGAGGCCCCAATGGAAGAANGCGGNAACA
    TGGGTTTCGCGGNCATATTCNGCTTCTCCAGCTCCGCCTCCTGCAGATCTCTTGGNCTTA
    GCGCGNCGAANTCTGGAACCAGCATCTCTCACCGTGNCCTCTCGGTGCAGGCTGAGCGNA
    NNTGNNATAATTCCTTTGCTGCTCTGCNAATAAGACATGGTACTGNTCTCTGTNCGGAAC
    TTGCGTNTCCATAGCCAGTTAGCTGAACTGTGGTGAAATGCGTCCTGGGCTTGCGGTTGG
    TCTTGTGCTTGCGTACGGTGCATGCTGNGGGACTCAGTNCNTNTGGCTGGGAGCNGGNAG
    AAGCNNGAACTCTGNNTCCACNGNNTCCGATCTANTTTNTCGNGGCTNTCAGCCTNCANC
    AGANNATCTTCTGGNATCTTGAGNANTCCTNCGACTGANAAATGNTCGAGATGCCGCGGA
    NGAGNAGGNCGNATNNTGTGCGCCCAGATANNCGGNCCNGNTGTCAAANGCTNCATCGAA
    NCNCNTGATGCCTGANNCCATTCAGAGGCNCCAGGATGCTCTTCTTGNTNCCNGCTTCCT
    NTGATCNGCCATGGAAAGCNTAATTCCANCANCCTGTCGGCCGTTACTAGNGGATCCGAG
    CTCGGTGCAAAGCTNNATGCCTANCNTGGATTTTTGNTNANGNCNNCTNAAAAANTTGNN
    CNNCCAAGGCCNTNANAGTTTNCANGGGGGAAATTGTTATCNCNCNCAANTTCCNAAAAA
    ATTGGANCGGAAGTTNAAAANGTTAAACCNNGGGGGGCCNANTGGAGGNGCTAGGCCNNT
    TAATGGGNTTGGGTTACNGGCCCCCTTNCAGNNGGGAAAANTGTCANGGGGNNNGGTTTT
    NTTAATGGCCCANGNCCGGGGGNAANNNGGTTGACNATTTGGGCCCNTCCCATTTNCCCC
    NNAANANCCCCNNNCNNANGGGCNNCAGNGGAANGNAGCGTNTNNTTTCCNC
  • Synonyms
    GUDMAP:5366 probe, maprobe:171
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Msx1 msh homeobox 1
Expression
  • Assay Results
    13
Sequences
X59251 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory