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MTF#215 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#215
  • Sequence Type
    cDNA
  • ID
    MGI:3506078
  • Region Covered
    Nucleotides 212-952 of GenBank Accession ID D13801.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/XhoI
  • Insert Size
    0.74kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CGCGGATCCGATCAGCAGTCAGATCCTCACG and CCGCTCGAGTTGAGAGCCTCTATGGCCTGCG. Template sequence provided by Paul Gray:
    CCCTCGAGTNGANAGCNTCTNTGGCCNGCGNNGTGAAGNAANNGCNCCNNTNGCNTTNCT
    NGNAGGGNTCGCCNCCNCACAAANTCCNTCAGGTNCNGNNGGCCTTCCNGGTTGCGNANN
    TCTGCCTCCNTCANCCANTTTTCCAAAACCGGNTNCANNTTCNGGNCNCNCTNGGGNGNN
    ATGNCCAATTTCNCAAACCNGCAAANGGNTNATNGGNTGNAGGCCGGCCCTTCNGNCNCC
    NNCAAANCCNGGCCCACCTGGGNCNGNGNCAAACCCAGGAAAANCCNCCGNATCTTAAAA
    TTCTNANCAAANTCCCGNATCNCTNCTAANTTNATCCCNNCCNCNTCCAAACTNGGGGNG
    NGCGGNTTTNATACCAANTGANNNACGGTNGGGGNCNCTNANCAGGNNATNGGAANGGNA
    NTTGCACCTNACGGNTTGANCNCTGGCNTTGGNNTGGNNAGNATNACNGCAGGCNGGGGN
    ACGGNTNGNGNCGNCNGANAAGNCNNNCCNCNNTCNTAACAAGGGANNCCCGNGNGNTTG
    GNTTCCNGANCNCCNCNNGNTNAAGNNAGGGGCTNCNNGNTNAGGNTNNCANNNCCTNGC
    CCTGGGCATTNNACNAGAACNTGGGAANCACNGCNTGGANCTNNNAGNTNNGNNGCCGGG
    NNGGTGNNGCCCACCCNACNTAATTTCNNTNCCNNCGAAAGGGCCAATANCCTGTGNCTG
    AGAANTCNNGAGGATNTGACTGCTGATCAGATCCACTACCTCTANAGCGGACNNCCCNCN
    GTGGANCCNCAACTNNTGTTCCCTTTAGAGANGGTNAATTCNAGCTTGAGNTNTCTCGGC
    NTAAATGNTCCTNNGTNAAATNTCATCCGCTCACAATCCCNNAACATANNAGCNNAACCN
    NANNNCNAAGCCGGNGNGNCCAAGATNANGNANTCCATNATGGCGTTTNCNANTGGCANT
    TTCNTGGGNAANTNTANGACCCTCATANGATCNANAGCTCGGNAAGGGGTTTNCATNCCN
    CCTNGNTNCTCCCCGACNNNGGNCGGA
  • Synonyms
    GUDMAP:5345 probe, GUDMAP:12241 probe, maprobe:150
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Pou6f1 POU domain, class 6, transcription factor 1
Expression
  • Assay Results
    58
Sequences
D13801 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory