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MTF#208 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#208
  • Sequence Type
    cDNA
  • ID
    MGI:3506072
  • Region Covered
    Nucleotides 181-941 of GenBank Accession ID X54628.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/HindIII
  • Insert Size
    0.76kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CGCGGATCCGCGTACCGCGAAGTGCAGAAGC and CCCAAGCTTGCCACGAAACGGCAGATGGTGG. Template sequence provided by Paul Gray:
    TCGACGGTATCGATAAGCTTGCCACGAAACGGCAGATGGTGGTCTGCGAGAACACGTTAC
    CGTAGAGGGTGCCCAGCGCCAGTCCCACGTCGGCCTGGGTGAAGCCCAGCTTGATGCGTC
    GTTGCTTGAACTGCTTGGCGAACTGCTCCAGGTCGTCGGAGCTGGGAGCATCCTCGTCCG
    AGTGCTCGCCCACCGACGAGCCACCACCGCCCGCGCCCGGGTGCAGGTGCGCCGCCGCCG
    CGTGCAGGCCGCCCGCGTGTGCATGTCCGTGTGCGTGTCCGTGTGCGCCCAGGTGCGGTG
    GTGGCGACGGCTCCAGCTGTGCCTCGTGGCCGTCCTCGTGCAGTGCGTGGTGCAGGCCGG
    GTCCCGCGCCGCCGCCTCCCGCCGCCAGCATCCCGGCCAGGCCGCCGCCGCCGCCACCGG
    NGTAGGCCGCCTGAGCGTACAGCCCGAGCGGCTGGGGCTGGTGACCCCCGCCGGCCCCGG
    GCGACGGCGACATGGCGGGGCCCAAGTGGTGCGCTGTGCCGCCTTGTGCCCATGCCGCGC
    CCGCGTGGGCCGCCCCTTGGTGCACCAGGCGGGCGTGGAAACCGCCGCCACCGCCGCCGT
    CGTCAGCTCGGCCGGTACCGCCACCGCCTGCCTTGCCGTGTTCCAGGTGCGGGCCGCCCG
    CCCAGTCGCCGCCGCCGCCTCCTCCCGTGGGTAGCCATTGAGGGTGCGCTAGGCCCACGG
    GGTGGCCCGCGCCCGCGCCCAGCCACTCGTGGTGCATCAGCTTCTGCACTTCGCGGTACG
    CGGATCCACTAGTTCTAGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTTGTTCCCTTT
    AGTGAGGGTTAATTTCGAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTGNGTGAAATG
    TTATCCGCTCANANTCCACANAAATACGANCCGAAANATAANTGTAAAGCCTGGGGNGCC
    TAATGAGNGAGCTAACNCCATTANTNGGNTNGGNTCACTGCCCGNTTTCAGTCGGGAAAC
    NTTTNNGNCANCTGCNTNATGAATCGCCCANCCCCNGGGNAAGNGGNTTGNNNATTGGGC
    CCNTTNCCNTTCNCNCTNAANAANGCNGGNCNGGG
  • Synonyms
    GUDMAP:5340 probe, GUDMAP:12799 probe, GUDMAP:12800 probe, GUDMAP:13919 probe, GUDMAP:20534 probe, maprobe:145
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Pou3f1 POU domain, class 3, transcription factor 1
Expression
  • Assay Results
    101
Sequences
X54628 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:186535 Herriges JC, et al., Genome-scale study of transcription factor expression in the branching mouse lung. Dev Dyn. 2012 Sep;241(9):1432-53
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory