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MTF#187 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#187
  • Sequence Type
    cDNA
  • ID
    MGI:3506057
  • Region Covered
    Nucleotides 271-1053 of GenBank Accession ID U66918.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/XhoI
  • Insert Size
    0.782kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCGGAATTCAGAAGGAGGCCATCACGTACCGG and CCGCTCGAGGTGCCGGGAACATCATGTAAGGC. Template sequence provided by Paul Gray:
    TCGAGGTGCCGGGAACATCATGTAAGGCGCGTGCGCGGCCAGGTGCGGATGCAGGTGGTG
    GTGCGCGTGCGCCACGGCGCTGTCCAGCTGCAGCTGCGCCTGAACCTGCTGAAATGGCAT
    CCTTAAAGCACCTACGTTGACATAGGGTGCAACTCTACAAGCTTCAAACTGGCTAGCGGC
    TCCTATAAGGACACCTTTGTGAAGTTGATTTTCCTGTTTTCTACACTTAGCTCTTCGATT
    TTGAAACCAAACCTGTACTCGGGCCTCAGAGAGCCCCAGTCGCTGGCTCAATTCCTCGCG
    CATGAAAGCGTCTGGATAGTGGGTCTCATCGAAAAGCCTCTCCAGCTCGTTGAGTTGTTC
    CAGGGTAAAATTGGTCCGACTTCGCCTCTGCTTGATTTTGGTCTGGCCTTCGTCCTCCAT
    CCCTTTCGCATCGTCTTTGCGATCCTTCAGTTCAGGGGACACCTCCGTCAGCCGCGGGCT
    GCCGGGCTCCCTGCTCCGCTCCGCGGCTCCCATGTCCAGCTCCCGGACGGGAGAGCGCCC
    TCCTCCAGCTCCTCCGCCTGCTCCTCCTCCTCCAGCACCTCCTCCGCCTCCTCCGGTACG
    TGATGGGCTCCTTCTGAATTCCTGCANTCCGGCGGATNCACTAANTNTAGAGCNGCCGCC
    ACCGCNGTGGAGCTNCAGCTTTTGTTCCGTTTAGTGAGGGNTAATTTCGAGCTTGGCGTA
    ANCATGNTCATAGGTGNTTCNTGNGNGAAATTGTNATCCGCNCACAATTCGGGANACATA
    NGANCNGGAAGCATANNCTGTAAAGCCTGGNGTGCCTAATGAGTGANCTAACTNACAGTA
    ANTGCGTNGCGCNCCNTGCCGCGTTCNAGCCGGNAACCNGNNGGNCAGCTGCTTNATGAA
    TCGCCACCCGNGGGNACAGCAGNTTGCGTATTGAGNCCTTTNCGCTTCTCGNTANTNANT
    CCNTTAATTGGCNTTCGGCTGGGCNACNTTTAACTNAACAAGGGGGNAACGGTTTCNGAA
    NCCGGGAAACGGGNAGNANTNGGNAAAGGCCNTANGCNCCACNAAAAAGNCNGGNNTGGG
    TTTTCTAGGNCGCCCCCANAA
  • Synonyms
    GUDMAP:5322 probe, maprobe:131
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Shox2 SHOX homeobox 2
Expression
  • Assay Results
    50
Sequences
U66918 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory