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MTF#136 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#136
  • Sequence Type
    cDNA
  • ID
    MGI:3506019
  • Region Covered
    Nucleotides 372-1133 of GenBank Accession ID BC017609.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/XhoI
  • Insert Size
    0.761kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CGCGGATCCGGGCTGAGTCTGACCACTTCGG and CCGCTCGAGCTTCCAAGAGGCAGTTTGGTCC. Template sequence provided by Paul Gray:
    CTCGAGCTTCCAGAGGCAGTTTGGTCCTTATAATCCAAGCAATCAGTGGTTGAGTTAAAA
    CCCAAGCTTGAAGCTCCATATCCCTGGGTGGAAAGAGAAGCTGGGGACTGATTGAGATGG
    CTGGTAACAGCATTGGTACCCATGGGACTGAGTGTGGCCCCTGGTCCAGGAAGCTGGTGA
    TGCATAGGGGTCAAATAAGATCCACAGTCCATGCCCCCAAAGTAGGAAGTTGAGCCAGCA
    TAGCCTTGACTATAACCTGAAGCCTGAGTATAGGTCATGGGATAGGACCTCTGCATGCAG
    GAGGAGGAAGTGGACAAGGGGTCAGACAGTGGGGAGATGGACGCTGGGCTCCAGATAGAC
    ACTGGAGCACTGCTGCTGGCAATGGTTGGGACTGAGGTACTAGAGGGGGGACTGAACTGG
    CCACTTGTTCCACTCTCTGAACTCACTTCCCGAGCTGGAGAGCTCTTCTTCTCGGCAGGC
    CTCACTTTGTTCTGACCTCCATTCTGCTGCTGCTGCTGCTGTTGGCGGCACTTAGCTCTT
    CGATTCTTAAACCATACCTGCGCCCTGGATTCTGGCAAGTTGATTTTCAGTGCCACCTCT
    TCCCTCATGAAGATGTCTGGGTATCGGGTCTTGGCAAACAGAGCTTCCAGAACGTCGAGC
    TGTGCCCTAGTAAATGTCGTCCTCTCCCTTCGCTGTTTCCGGGGGGTGGCGGGGTAGCCC
    ACGGAGGGATGCAGCAAGTCCATAGGATCCGCGGATCCACTAGTTCTAGAGCGGCCGCCA
    CCGCGGTGGAGCTCCAGCTTTTGTTCCCTTTAGTGAGGGTTAATTTCGAGCTTGGCGTAA
    TCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCACACAACATAC
    GAGCCGGAAGCATAAATGTAAAGCCTGGGGNGCCTANGAGTGAGCTAACTCNNNTNATTG
    CGNTGCGCTCCTGNCCGCTTTCAGTCGGGAAACTGTCNGGCANCTGCATAATGATCCNCC
    NCCCCNGGGAAAGCGGTTGCNNATGGGGCNNTNCCTTCCCNCTNTNAANCTGCCCGGGCT
    TCGGTGGGGANGGTTNNCCCCNNANGGGGAACGNTT
  • Synonyms
    GUDMAP:5280 probe, maprobe:96
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Otx2 orthodenticle homeobox 2
Expression
  • Assay Results
    73
Sequences
BC017609 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:152838 Fu H, et al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development. J Neurosci. 2009 Sep 9;29(36):11399-408
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory