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MTF#131 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#131
  • Sequence Type
    cDNA
  • ID
    MGI:3506014
  • Region Covered
    Nucleotides 421-1010 of GenBank Accession ID Y11717.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/XhoI
  • Insert Size
    0.579kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CGCGGATCCACGGTGGCTACCCCTACCAAGC and CCGCTCGAGCTTCTCCAGCTCTACCAGCTGC. Template sequence provided by Paul Gray:
    GNTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTCCGCTCGAGCTTCTC
    CAGCTCTACCAGCTGCGCGCTCGTGTACGCCGTGCGCGCGCGCTTGGACGAGGCCTGCCC
    AGGCGGGCTCTTGTCACCAGCGCAGCTCTCCCCTGAGCTGGAGCCGCTGGTTTTCTGCTT
    AGTGTTCTGCCTTGACTCTTTCATCCAGGGAAAGATTTGTTTGCCCACGGTGGGGGCTGT
    GGAGGCTGGGGCGCTGGGGGCGCTGCCTGGGGAGGAGGTGGAGGCAAAGGTGGTTCACCC
    AGGCCTGGGGGCTGACTAGGAGGGCCGCTCAGGGTGCGCAGACAAGCTTCGCTCAGCTCA
    TGAGTTTTGGGGTGGCCCCCAGCGCTGGCGGGAGACTGGAGGGAGCAGGCAGGTCGATGG
    TACTCAACGCCATCGGTGCCCAGAGCGGCGGACGGCGCGTATGGCTGCTGACTGGCATTG
    TAAGCGAACCCATTGGCTGCTTGGTAGGGGTAGCCACCGTGGATCCGCGAAGCCGAATTC
    CAGCACACTGGCGGCCGTTACTAGTGGATCCGAGCTCGGTACCAAGCTTGATGCATAGCT
    TGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTG
    TGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTA
    AAAGCCTGGGGGTGCCTAATGAGTGAGCTAACTCACAATTAATTGCGGTTGCGCTCACTG
    CCCCGCTTTCCAGTCGGGAAACNTGTCGTGGCCAGCTGCATTNAATGAATCCGCCNACGC
    GCGGGGAGANGCGGTTTGCGTATTGGGGGNTTTTTCCGCTTNCTCGNTCACTGACTCGCT
    GNCCTCGGTCGTTCGGCTTCGGCGAAGNGGNNTAGGCTCCCTCAAAGGNGGGAATACNGG
    TTTTCCNCGNATNCGGGGNAAACCCCGGAAAAAAAATTNGAGCNAAAGGCCGGCAAANGC
    CCGGAACNTANAAAAGGCCNNCTTGGNGGNGTTTTTCNAANGCCCCGCCCCCTNGANANA
    NTTCNAAAACNCNCCCTNANCTTAAAGA
  • Synonyms
    GUDMAP:5274 probe, GUDMAP:12909 probe, GUDMAP:12910 probe, maprobe:92
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Hoxa3 homeobox A3
Expression
  • Assay Results
    71
Sequences
Y11717 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory