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MTF#126 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#126
  • Sequence Type
    cDNA
  • ID
    MGI:3506009
  • Region Covered
    Nucleotides 667-1397 of GenBank Accession ID AF295369.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/XbaI
  • Insert Size
    0.73kb
  • Note
    Fragment was generated by PCR with primers CGCGGATCCCTACACGTCGACTCGCTCACG and TGCTCTAGACAACTGCACAGCCCTCACTGG. However, the 3' primer does not match the proposed gene. Template sequence provided by Paul Gray:
    CTCGAGGTCGACGGTATCGATAAGCTTGATATCGAATTCCTGCAGCCCGGGGGATCCCTA
    CACGTCGACTCGCTCACGGACCACTCGTGCTCAGCGGAGTCAGATGGGGAAAAATTGCCC
    TGCCGCGCCGGGGATGCCTTGTGCGAATCAGGCTCAGAGTGTAAGGACTAGTTTGAGGAC
    CTGGAGGACGAGGAGGACGAGGAAGACGAGTGCGAGCGGGACCTGGCGCCACCCAAGCCC
    GTAACCTCCTCGCCTCTCACCGGCGTGGAGGCACCCCTGCTGAGCCCGGCGCCCGAAGCC
    GCGCCGCGCGGTGGCAGCGGTGGCAAGACGCCCCTAGGCAGCCGGACGTCGCCAGGAGCG
    CCGCCGCCCGCCAGCAAACCCAAGCTGTGGTCGCTGGCCGAGATAGCCACGTCGGACCTC
    AAGCAACCAAGCTTGGGCCCGGGTTGCGGGCCTCCGGGGCTGCCTGCTGCCGCCGCGCCT
    GCCTCGACTGGGGCCCCTCCGGGAGGCTCGCCCTACTCTGCTTCGCCCCTGCTGGGCCGC
    CACCTCTATTACACGTCCCCTTTCTATGGCGACTACACAAACTACGGGAACTTAAACGCA
    GCGCTGCAAGGCCAGGGCCTTCTGCGGTACAATACCGCGGCCTCCTCACCAGGCGAGACA
    CTGCACGCCATGCCCAAGGCGGCCAGCGACACGGGCAAGGCGGGCTCGCATTCACTGGAG
    TCCCACTGCAGGCCTCCGGGCGGCGGCTACGAGCCCAAGAAAGATACCAGTGAGGGCTGT
    GCAGTTGTCTAGAGCGGCCGCCACCGCGGNGGAGCTCCAGCTTTTGTTCCCTTTAGTGAG
    GGTNANTTCNAGCTTGGCGTAATCATGGTCATAGCTGNTTCCTGTGTGAAATGNTATCCG
    CTCACATTNCCCCNAAATACGAGCCGGAAGCATAAGTGTAAACCTGGGGNGCCTATGAGN
    GANCTACTCCANTNATTGNGTNGGCTCCTGNCGCTTTCAGTCGGAAACTGTNNGCNCCTN
    NTTATGATCGCCACCCCGGGGAAGGGGTTNNNNTTGGGGCCNTCNNTCCNCCTNTGAANC
    NTGCCNGGGNTNGGNGGGGNNGGTNCNCCCTCAGGGGNAACGTTNCNNAACGGGAA
  • Synonyms
    GUDMAP:5270 probe, GUDMAP:12901 probe, GUDMAP:12902 probe, maprobe:87
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Irx2 Iroquois homeobox 2
Expression
  • Assay Results
    73
Sequences
AF295369 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory