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MTF#59 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#59
  • Sequence Type
    cDNA
  • ID
    MGI:3505951
  • Region Covered
    Nucleotides 301-1042 of GenBank Accession ID M84817.
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.74kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCGGAATTCCTTCTCTGTCATCAGCTCCC and CCCAAGCTTGCGATCAGCAGCTCGTTCCAGC. Template sequence provided by Paul Gray:
    GTCGACGGTATCGATAAGCTTGCGATCAGCAGCTCGTTCCAGCCTGCCCGTAGCAGGATG
    ACCTGGTCGTCTAGGGGCAGCTCAGAAAAGTGTGGGATCCTCTTGGCCCACTCCACAAGA
    GTGAAGAGCTGCTTGTCTGCTGCTTGACAGATGTTGGTAACAGGGTCACTTGGTGAGCTG
    GGGTTCAGCCCCATGTTTGCCTCCACGTATGTCTCAGTCTTGGGCTCGACAGCAAGCTCG
    GCTTCCAGAATCTTCTCTACAGGCATGTCCTCGTTGGCACTGCTGGTGGACTCCACCTCG
    TTCTCATTCCGGTCCTTGCCCCGCTGCCGCTCCTCCTGCACAGCTTCCCGCTTCATGCCC
    ATGGCCAGGCACTTCTGGTAGCGGCAGTACTGACACCGGTTCCGCTGTCTCTTGTCGATC
    AGGCAGTCCTTGTTGTCTCGGCAGGTGTAGGTCAGGTCTTTGCGTACTGTCCTCTTGAAG
    AAGCCCTTGCAGCCCTCACAACTGTATACCCCATAGTGTTTGCCTGAGGAGCGGTCCACA
    CAGATAGCACAGATGTGCTTGGTGAAGGAGGCCATATTTCCTGAGGGATGGGCAGGAACC
    TTGAGGACGCCATTGAGGCCTAGTGGCGGCTTGATATCCTCAGTGCTGCACACAGGGTTC
    ATGGGTGATTGAGCTGGGGGGCTACCAGTCCCGAANCCCGATGTGGGTGTGGTGGGTTAC
    CNAATGGAGTGCGGCCCATGGGGGANCTGATGACAANAAGGANTCCTGCANCCCGGGGGN
    NCNNCNANTTTAGAGNGNCGCCACGCGGNGGANCTCCAGCTTTTTNTCCCTTNAGNGAGG
    GTATNTTCNACCTGGCGTAATCANGGGCCCAANCTGTTTCCTGGGGGAAATTNTTATTCC
    GCCTCNAATTNCCCACAAACANAAAAGCCCGGAANNANAAANGGTAAANCCTNGGGGGGC
    CTAATGAGGGAGCCTAACCCCCANTTAATTNGGTTTGGGCCTACNTGNCCCGCTTTTCAA
    TNNCGGGAAAACNTGTNNTGGCCCNCCTGTATTTANTNNANCNGCC
  • Synonyms
    GUDMAP:5219 probe, GUDMAP:12845 probe, GUDMAP:12846 probe, maprobe:44
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Rxra retinoid X receptor alpha
Expression
  • Assay Results
    91
Sequences
M84817 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:152838 Fu H, et al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development. J Neurosci. 2009 Sep 9;29(36):11399-408
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory