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MTF#55 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#55
  • Sequence Type
    cDNA
  • ID
    MGI:3505947
  • Region Covered
    Nucleotides 1021-1770 of GenBank Accession ID U14666.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/HindIII
  • Insert Size
    0.749kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CGCGGATCCTGTCAGCCGAAGACCTGGAGCC and CCCAAGCTTGGTCTCTGGCTCTTTCCTCTGG. Template sequence provided by Paul Gray:
    ANCCCCCCCNNCCCACNACNACNNNCNTNCNTCTNNTATNNNNNCTCANTCNNTTNANNN
    CTACGGAAANNCCTAANNCNNTNTNGTNTTNCGGTACGCAGGTATCTAGTAACAGACAAA
    CTAGGCAGCTATGCAGCTACAAGGGCGCTGGGTAGGNAAGTCCTACTATATTGGCTTATT
    GTTAGGACTCTACCTGGATGAAAACTTGTACAGCCCATCAACAGGACAACANCNTGTGNN
    GGAGGGGTGNAATCANAANGTAANGTAANAGNNNTTCTGNCCCTTTNTGGNNTTGCGGGG
    GAANGGANNATCGATNCCCAAANTNCAANNNTTNNCCCTCCNCANAAANGTNCCCCANCC
    CCGGGGCTCNNTTTNAGNAANATNCNTCCCNNTNAACNCNATCTTCCCNACCCCNNTNGN
    NCNCTTNGCNCANCTCTNTNNNAANNNTNATNATANNTGTNCNCGCGNGNGCANCCANTA
    AAACNAANAGNGGNCANAATCNNTNTGGTCNTCNCCCTNANNNGTNTAANANNNAGGNGT
    NNCNANCCNTTCGGNNCCCTAAACNCNAANNNNNGNNCNCNTNAAAAAAANNGCNANCAN
    AACGNATANANCCNGCACCCCNCNNACCAANTNNTCCNANCNCTNTATNCNCANCNTTTA
    NATNGGCANGNNNNNGNNNCGCCTCNNCTTTTTTTTTCGCCCNTCTNCCCTNTNCTNTCT
    TGGTAATATTATNTCTTNCCNNCCACCCCGTNTCCNNNTGNTCTGCCGTACNNNCNATCC
    NNTTCNTTTTCNNTCNATTANGCAATNATNTNNCCCTTTATTAANTACCGATNNACCANN
    NATATNACATANANTACTNTGATNNTTCNGCNCCCANTANCAATANNATNGNCNNNNCNC
    CCCCTCTTAAATCGCGTGTNCANNGNGCGNTCACNACANNCNCAGNTAANCGCANNTAAN
    CNNNTCTTACCNNATNGANNATNCTTATNCTTGNTNNTNNTNCNTTTCCCGNGACCNCCA
    TNTANAACACAGCCNNCNTAGCNNNCNNTNTATGATANTCTNCCCCTCNTCGNNNGTCNT
    NCCCTTGTTTTTTTTNNCCACGCCCTCCTNATTNGTACNCACTGNTTCNNCGCCCCCCNC
    CNCNTTTCTNCTATNCATTNTNNNCCGNTGTCNCTCTNTCTNCGCTCCCCCGCCCTCCNC
    CNCTCTGCTATAATAGNACGATATAGAGANCCGNNTNNNGGTTTCCCGGNTNTNNTTGNN
    NNNCNGNNCCATTATATTTTTANNTAGAAGTGTCAGNNANCATNNACNNTNCCGNACTGN
    NNACACNCGCGCCNGNCANATATCTTTTGGCCCCATCGTGNCNANGGTATNTCCCATACN
    CCCANAGTGTTTNACTTCTCNANTTANATTANGCCCNTNCNCCCNCNNNCNCCCCACCCN
    TAATTNGCTGCANCNANTNTNANAANGAANAGANAACGNGAGCTACANCGNNANNCNNCA
    CCGNGCCGCCNGNCGCCCTATCTNNCGNCCCGCANANCACGTTCCCCNGNNTNNNTCNGG
    ACNNGCTNTNCCGNATTANTNNACTCNNANGACCGTCNCNCNTCTNCATNTCNATATNTG
    NNANCCGCCNCACCNCNCANTATTTATTTACNATNGCNCGCGTCNNTNNTTTNNTTCNAC
    CTATACNTNNTCNNCANNTCTGNAANCNACNCCACNGCCAATCANGNNNTNACTAGCTTA
    NTTTATTATGCNACCNAACAAAAANNTACCCANATGGAATAAANTNTNNNCCTCCNCNNN
    CCCAAACTNCTTNNANNATANTNNTATCCCNCCN
  • Synonyms
    GUDMAP:5214 probe, GUDMAP:5215 probe, maprobe:1295
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Nr6a1 nuclear receptor subfamily 6, group A, member 1
Expression
  • Assay Results
    55
Sequences
U14666 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory