RFLP Polymorphisms for H2-Eb1

RFLP Polymorphisms

Symbol
Name
ID
Location

H2-Eb1
histocompatibility 2, class II antigen E beta
MGI:95901
Chr 17 (17.98 cM)

Reference	Probe	Endonuclease	Allele	Fragments	Strains
J:1761	H2-Eb 3' frag	Not Specified	a	394bp	B10.ASR1, B10.ASR12, B10.TBR11
			b	955bp	B10.ASR7, B10.ASR11
			c	28bp	B10.DSR5
			d	433bp	B10.DSR3
J:3040	pE-beta	TaqI	c	3.0kb	C3H/HeJ
J:3040	pE-beta	TaqI	s	2.3kb	M. spretus
J:6885	probe 3	BamHI	a	6.2kb	A, B10.M-H2^ap1/(11R)
			b	8.2kb	A.SW-H2^s/Sn, B10.Q-H2^q/SgJ, C57BL/6
			c	4.8kb	B10.D2-H2^d, BALB/c
J:6885	probe 3	EcoRI	b	15.0kb	B10.M-H2^ap1/(11R)
J:6885	probe 3	EcoRI	c	2.0kb	A, A.SW-H2^s/Sn, B10.Q-H2^q/SgJ, BALB/c, C57BL/6
J:6885	probe 3	KpnI	a	24.6kb	A.SW-H2^s/Sn
			b	9.6kb	B10.A-H2ⁱ³/(3R), B10.A-H2ⁱ⁵/(R5)SgSn, C57BL/6
			c	16.7kb	A, B10.A-H2^h4/(4R), BALB/c, C3H
J:6885	probe 4	BamHI	a	6.2kb	A, A.TL-H2^t1, B10.A-H2^h4/(4R), B10.M-H2^ap1/(11R), B10.S-H2^as1/(8R)/J, C3H
			b	8.2kb	A.SW-H2^s/Sn, B10.A-H2ⁱ³/(3R), B10.A-H2ⁱ⁵/(R5)SgSn, B10.Q-H2^q/SgJ, B10.RSB4, B10.RSB5, B10.S-H2^t4/(9R)/J, C57BL/6
			c	4.8kb	B10.GD-H2^g2, BALB/c
J:6885	probe 4	EcoRI	b	6.2kb	B10.A-H2^h4/(4R), B10.GD-H2^g2, B10.RSB1, B10.RSF1, B10.TBR2, C57BL/6
J:6885	probe 4	EcoRI	c	12.2kb	A, A.SW-H2^s/Sn, B10.A-H2ⁱ³/(3R), B10.A-H2ⁱ⁵/(R5)SgSn, B10.D2-H2^d, B10.M-H2^ap1/(11R), B10.Q-H2^q/SgJ, B10.S-H2^t4/(9R)/J, BALB/c, C3H
J:6885	probe 4	KpnI	a	24.6kb	A.SW-H2^s/Sn
			b	7.1kb	C57BL/6
			c	16.7kb	A, B10.RSB1, B10.RSB2, B10.RSB3, B10.RSB4, B10.RSB5, B10.RSF1, B10.TBR2, BALB/c
			d	24.2kb	B10.M-H2^ap1/(11R)
J:6885	probe 5	EcoRI	b	6.2, 6kb	B10.A-H2^h4/(4R), B10.GD-H2^g2, C57BL/6
J:6885	probe 5	EcoRI	c	12.2, 6kb	A, A.SW-H2^s/Sn, B10.A-H2ⁱ³/(3R), B10.A-H2ⁱ⁵/(R5)SgSn, B10.D2-H2^d, B10.S-H2^t4/(9R)/J, BALB/c, C3H
J:6885	probe 5	KpnI	a	24.6kb	A.SW-H2^s/Sn, B10.S-H2^as1/(8R)/J
			b	9.0kb	A, B10.HTT-H2^t3, B10.S-H2^t4/(9R)/J, C3H, C57BL/10
			c	6.5kb	BALB/c
J:7675	probe 3	BamHI	a	12.0kb	C3.t¹², C3H, STOCK t^w32
J:7675	probe 3	BamHI	b	11.0kb	C3.t^w5
J:8530	probe 4	BamHI	a	6.2kb	B10.RFB2, B10.RFB3, B10.RFD7, B10.RKB, B10.RKD6, B10.RKD7, B10.RKF3, B10.RKQ2
			b	8.2kb	B10.RBF, B10.RQB3
			c	3.8kb	B10.RPF1
J:8530	probe 4	EcoRI	a	12.0kb	B10.RBF, B10.RFB2, B10.RFB3, B10.RFD7, B10.RKD6, B10.RKD7, B10.RKF3, B10.RKQ2, B10.RPF1, B10.RQB3
J:8530	probe 4	EcoRI	b	6.2kb	B10.RKB
J:8530	probe B1	Asp718	a	24.0kb	B10.RFD7, B10.RKD6, B10.RKD7, B10.RKF3, B10.RKQ2, B10.RPF1
			b	17.0kb	B10.RFB2, B10.RFB3, B10.RKB, B10.RQB3
			c	7.1kb	B10.RBF
J:8530	probe B1	BamHI	a	6.2kb	B10.RFB2, B10.RFB3, B10.RFD7, B10.RKB, B10.RKD6, B10.RKD7, B10.RKF3, B10.RKQ2
			b	8.2kb	B10.RBF, B10.RQB3
			c	3.8kb	B10.RPF1
J:8530	probe B1	EcoRI	a	2.0kb	B10.RBF, B10.RKB, B10.RKD6, B10.RKD7, B10.RKF3, B10.RKQ2, B10.RQB3
			b	11.0kb	B10.RFB2, B10.RFB3, B10.RFD7, B10.RKD3
			c	5.8kb	B10.RPF1
J:8530	probe B1	PstI	a	2.8kb	B10.RFB2, B10.RFB3
			b	3.0kb	B10.RBF, B10.RKB, B10.RKD6, B10.RKD7, B10.RKF3, B10.RKQ2
			c	2.9kb	B10.RPF1
J:8530	probe Ba	EcoRI	a	12.0kb	B10.RBF, B10.RFB2, B10.RFB3, B10.RFD7, B10.RKD6, B10.RKD7, B10.RKF3, B10.RKQ2, B10.RPF1, B10.RQB3
J:8530	probe Ba	EcoRI	b	6.2kb	B10.RKB
J:8530	probe Ba	PstI	a	3.2kb	B10.RFB2, B10.RFB3, B10.RQB3
			b	0.80kb	B10.RBF, B10.RFD7, B10.RKD6, B10.RKD7, B10.RKF3, B10.RKQ2
			c	1.8kb	B10.RKB, B10.RPF1
J:9594	pE-beta	HpaI	c	23kb	C3H/HeJ-Fasl^gld/J
J:9594	pE-beta	HpaI	s	15kb	M. spretus
J:9594	pE-beta	TaqI	c	3.0kb	C3H/HeJ-Fasl^gld/J
J:9594	pE-beta	TaqI	s	2.3kb	M. spretus
J:15532	probe 5	EcoRI	a	6.0, 6.0kb	B10.DRB62, B10.STA62, C57BL/6
J:15532	probe 5	EcoRI	b	12.2, 6.0kb	A.SW-H2^s/Sn, B10.CAS2, B10.KPA44, B10.STA10, BALB/c, C3H
J:15532	probe 5	KpnI	a	6.5kb	BALB/c
			b	25.0kb	A.SW-H2^s/Sn, B10.CAS2, B10.KPA44, B10.STA10
			c	9.0kb	B10.DRB62, B10.STA62, C3H, C57BL/6
J:20596	probe 3	BamHI	b	13.0kb	C57BL/6, CTS, ILI, NOD
			c	5.5kb	BALB/c
			n	4.8kb	NON
J:20596	probe 3	EcoRI	b	2.1kb	C57BL/6, CTS, ILI, NOD, NON
J:20596	probe 3	EcoRI	c	1.9kb	BALB/c
J:20596	probe 3	HindIII	b	8.0kb	BALB/c, C57BL/6, CTS, ILI, NOD
J:20596	probe 3	HindIII	n	3.1kb	NON
J:20596	probe 3	KpnI	b	10.5kb	C57BL/6
			c	15.0kb	BALB/c, NON
			i	23.5kb	CTS, ILI, NOD
J:20599	Eb probe	PstI	0	2.1, 1.5kb	C57BL/10
			e	1.5, 1.0, 0.9kb	B10.MOL(SGR)-Prdm9^wm7 H2^wm7
			x	3.3, 2.1, 1.9, 1.1kb	B10.A-H2^a
			y	2.1, 1.9, 1.5kb	MR21b
			z	3.3, 1.5kb	R228BmR1
J:29570	E-beta-probe	BamHI	b	not given	C57BL/6
			c	not given	BALB/c
			n	not given	NOD
J:29570	E-beta-probe	KpnI	b	~9.6kb	C57BL/6
			c	~18.0kb	BALB/c
			n	~23.2kb	NOD
J:44833	Saha probe	Not Specified	a	smallest	P/J
			b	larger	C57BL/6J, CAST/EiJ, CBA/J, RIIIS/J, SM/J
			c	larger than above	A.CA-H2^f/Sn, SJL/J
			d	larger than above	SWR/J
			e	larger than above	M. caroli, M. spretus
			f	larger than above	DBA/2J

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