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probe 4 Probe Detail
Nucleotide
Probe/Clone
  • Name
    probe 4
  • Sequence Type
    genomic
  • ID
    MGI:16935
  • Region Covered
    encodes sequence from the central portion of the large intron between exons 2 and 3
  • Parent Clone
    clone 39.1
  • Insert Site
    Sau3A
  • Insert Size
    600bp
Source
  • Species
    mouse, laboratory
  • Strain
    BALB/c
  • Sex
    Male
  • Tissue
    sperm
Genes
H2-Eb1 histocompatibility 2, class II antigen E beta
Polymorphisms
J:6885 Steinmetz M, et al., Nature. 1982 Nov 4;300(5887):35-42
Endonuclease Gene Allele Fragments Strains
BamHI H2-Eb1 a 6.2kb A, A.TL-H2t1, B10.A-H2h4/(4R), B10.M-H2ap1/(11R), B10.S-H2as1/(8R)/J, C3H
b 8.2kb A.SW-H2s/Sn, B10.A-H2i3/(3R), B10.A-H2i5/(R5)SgSn, B10.Q-H2q/SgJ, B10.RSB4, B10.RSB5, B10.S-H2t4/(9R)/J, C57BL/6
c 4.8kb B10.GD-H2g2, BALB/c
EcoRI H2-Eb1 b 6.2kb B10.A-H2h4/(4R), B10.GD-H2g2, B10.RSB1, B10.RSF1, B10.TBR2, C57BL/6
c 12.2kb A, A.SW-H2s/Sn, B10.A-H2i3/(3R), B10.A-H2i5/(R5)SgSn, B10.D2-H2d, B10.M-H2ap1/(11R), B10.Q-H2q/SgJ, B10.S-H2t4/(9R)/J, BALB/c, C3H
KpnI H2-Eb1 a 24.6kb A.SW-H2s/Sn
b 7.1kb C57BL/6
c 16.7kb A, B10.RSB1, B10.RSB2, B10.RSB3, B10.RSB4, B10.RSB5, B10.RSF1, B10.TBR2, BALB/c
d 24.2kb B10.M-H2ap1/(11R)
J:8530 Lafuse WP, et al., Immunogenetics. 1986;24(6):352-60
Endonuclease Gene Allele Fragments Strains
BamHI H2-Eb1 a 6.2kb B10.RFB2, B10.RFB3, B10.RFD7, B10.RKB, B10.RKD6, B10.RKD7, B10.RKF3, B10.RKQ2
b 8.2kb B10.RBF, B10.RQB3
c 3.8kb B10.RPF1
EcoRI H2-Eb1 a 12.0kb B10.RBF, B10.RFB2, B10.RFB3, B10.RFD7, B10.RKD6, B10.RKD7, B10.RKF3, B10.RKQ2, B10.RPF1, B10.RQB3
b 6.2kb B10.RKB
References
J:6885 Steinmetz M, et al., A molecular map of the immune response region from the major histocompatibility complex of the mouse. Nature. 1982 Nov 4;300(5887):35-42
J:8530 Lafuse WP, et al., Recombination hot spots within the I region of the mouse H-2 complex map to the E beta and E alpha genes. Immunogenetics. 1986;24(6):352-60
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
MGI 6.23 		The Jackson Laboratory