GO Annotations Graph

• Symbol: Sf3b1
• Name: splicing factor 3b, subunit 1
• ID: MGI:1932339

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003682	chromatin binding	IDA	J:96358
Molecular Function	GO:0003682	chromatin binding	IDA	J:158823
Molecular Function	GO:0003682	chromatin binding	IDA	J:96358
Molecular Function	GO:0003682	chromatin binding	IDA	J:96358
Molecular Function	GO:0003682	chromatin binding	IDA	J:96358
Molecular Function	GO:0003682	chromatin binding	IDA	J:96358
Molecular Function	GO:0003682	chromatin binding	IDA	J:96358
Molecular Function	GO:0003729	mRNA binding	IBA	J:265628
Molecular Function	GO:0005515	protein binding	IPI	J:96358
Molecular Function	GO:0005515	protein binding	IPI	J:96358
Molecular Function	GO:0003723	RNA binding	ISO	J:164563
Molecular Function	GO:1990935	splicing factor binding	ISO	J:164563
Cellular Component	GO:0110016	B-WICH complex	ISO	J:164563
Cellular Component	GO:0071013	catalytic step 2 spliceosome	ISO	J:164563
Cellular Component	GO:0071013	catalytic step 2 spliceosome	IBA	J:265628
Cellular Component	GO:0000785	chromatin	IDA	J:158823
Cellular Component	GO:0016363	nuclear matrix	IDA	J:158823
Cellular Component	GO:0016607	nuclear speck	ISO	J:164563
Cellular Component	GO:0005730	nucleolus	NAS	J:319968
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:158823
Cellular Component	GO:0005634	nucleus	IDA	J:215371
Cellular Component	GO:0005634	nucleus	ISS	J:137212
Cellular Component	GO:0030532	small nuclear ribonucleoprotein complex	IDA	J:158823
Cellular Component	GO:0005681	spliceosomal complex	IEA	J:60000
Cellular Component	GO:0034693	U11/U12 snRNP	ISO	J:65061
Cellular Component	GO:0005689	U12-type spliceosomal complex	ISO	J:164563
Cellular Component	GO:0005689	U12-type spliceosomal complex	IBA	J:265628
Cellular Component	GO:0005686	U2 snRNP	IBA	J:265628
Cellular Component	GO:0005686	U2 snRNP	ISO	J:65061
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	ISO	J:164563
Cellular Component	GO:0071004	U2-type prespliceosome	IBA	J:265628
Cellular Component	GO:0005684	U2-type spliceosomal complex	ISO	J:164563
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:96358
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:96358
Biological Process	GO:0001825	blastocyst formation	IMP	J:244597
Biological Process	GO:0001825	blastocyst formation	IMP	J:215371
Biological Process	GO:0006338	chromatin remodeling	NAS	J:320057
Biological Process	GO:0006397	mRNA processing	IEA	J:60000
Biological Process	GO:0000398	mRNA splicing, via spliceosome	ISO	J:164563
Biological Process	GO:0000398	mRNA splicing, via spliceosome	IMP	J:215371
Biological Process	GO:0000398	mRNA splicing, via spliceosome	ISO	J:65061
Biological Process	GO:0035066	positive regulation of histone acetylation	NAS	J:319968
Biological Process	GO:0045943	positive regulation of transcription by RNA polymerase I	NAS	J:319968
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	NAS	J:319696
Biological Process	GO:0045945	positive regulation of transcription by RNA polymerase III	ISO	J:164563
Biological Process	GO:0008380	RNA splicing	IEA	J:60000
Biological Process	GO:0000245	spliceosomal complex assembly	IBA	J:265628