Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  11
• Reference
  J:37827 Watkins-Chow DE, et al., Genetic mapping of 21 genes on mouse chromosome 11 reveals disruptions in linkage conservation with human chromosome 5. Genomics. 1997 Feb 15;40(1):114-22
• ID
  MGI:48329

Genes

Gene	Assay Type	Description
Zrsr2-ps1	reported elsewhere
Adra1b	reported elsewhere
Gabra1	reported elsewhere
Gabrg2	reported elsewhere
Itk	SSCP	Itk-pA, Itk-pB
D11Mit22	reported elsewhere
Flt4	Southern analysis	Flt4 cDNA
Mgat1	Southern analysis	Mgat1 genomic
Tcf7	Southern analysis	Tcf7 cDNA
Il4	reported elsewhere
Irf1	reported elsewhere
Gdf9	SSCP	Gdf9-pA, Gdf9-pB
Il5	reported elsewhere
Csf2	reported elsewhere
Il3	reported elsewhere
Anxa6	reported elsewhere
Sparc	reported elsewhere
Glra1	reported elsewhere
Gria1	reported elsewhere
Wnt3a	reported elsewhere
Pmp22	Southern analysis	Pmp22 probe
D11Mit5	reported elsewhere

Notes

• Experiment
  Progeny of 3 crosses were combined to produce this data: (CASA/Rk x DF/B-df/df)F1 x DF/B-df/df, (VT-vt/vt x CASA/Rk)F1 x VT-vt/vt, B6C3-spd/spd x (CASA/Rk x B6C3-spd/spd)F1. Clusters of unresolved genes included (Adra1b, Gabra1, Gabrg2, Itk), (Flt4, Mgat1), (Il4, Irf1, Gdf9), and (Csfgm, Il3, Anx6); for these clusters the authors cited recombinant fractions for Adra1, Flt4, Il4, and Csfgmrespectively.

CROSS

• Type
  Backcross, sexes unspecified or combined
• Strain
  various
• Strain
  various

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Zrsr2-ps1	Adra1b	4	192
Zrsr2-ps1	Gabra1	4	192
Zrsr2-ps1	Gabrg2	4	192
Zrsr2-ps1	Itk	4	192
Adra1b	D11Mit22	18	922
Gabra1	D11Mit22	18	922
Gabrg2	D11Mit22	18	922
Itk	D11Mit22	18	922
D11Mit22	Flt4	17	1197
D11Mit22	Mgat1	17	1197
Flt4	Tcf7	35	1106
Mgat1	Tcf7	35	1106
Tcf7	Il4	11	898
Tcf7	Irf1	11	898
Tcf7	Gdf9	11	898
Il4	Il5	2	1455
Irf1	Il5	2	1455
Gdf9	Il5	2	1455
Il5	Csf2	3	1348
Il5	Il3	3	1348
Il5	Anxa6	3	1348
Csf2	Sparc	7	1662
Il3	Sparc	7	1662
Anxa6	Sparc	7	1662
Sparc	Glra1	1	1137
Glra1	Gria1	9	753
Gria1	Wnt3a	13	727
Wnt3a	Pmp22	3	347
Pmp22	D11Mit5	6	344

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Zrsr2-ps1	Adra1b	4	196	2.041	1.010
Zrsr2-ps1	Gabra1	4	196	2.041	1.010
Zrsr2-ps1	Gabrg2	4	196	2.041	1.010
Zrsr2-ps1	Itk	4	196	2.041	1.010
Adra1b	D11Mit22	18	940	1.915	0.447
Gabra1	D11Mit22	18	940	1.915	0.447
Gabrg2	D11Mit22	18	940	1.915	0.447
Itk	D11Mit22	18	940	1.915	0.447
D11Mit22	Flt4	17	1214	1.400	0.337
D11Mit22	Mgat1	17	1214	1.400	0.337
Flt4	Tcf7	35	1141	3.067	0.510
Mgat1	Tcf7	35	1141	3.067	0.510
Tcf7	Il4	11	909	1.210	0.363
Tcf7	Irf1	11	909	1.210	0.363
Tcf7	Gdf9	11	909	1.210	0.363
Il4	Il5	2	1457	0.137	0.097
Irf1	Il5	2	1457	0.137	0.097
Gdf9	Il5	2	1457	0.137	0.097
Il5	Csf2	3	1351	0.222	0.128
Il5	Il3	3	1351	0.222	0.128
Il5	Anxa6	3	1351	0.222	0.128
Csf2	Sparc	7	1669	0.419	0.158
Il3	Sparc	7	1669	0.419	0.158
Anxa6	Sparc	7	1669	0.419	0.158
Sparc	Glra1	1	1138	0.088	0.088
Glra1	Gria1	9	762	1.181	0.391
Gria1	Wnt3a	13	740	1.757	0.483
Wnt3a	Pmp22	3	350	0.857	0.493
Pmp22	D11Mit5	6	350	1.714	0.694