Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  2
• Reference
  J:38067 Blanco G, et al., Genetic mapping of protein kinase C theta (Pkcq) to mouse chromosome 2. Mamm Genome. 1997 Jan;8(1):70-1
• ID
  MGI:48003

Genes

Gene	Assay Type	Description
D2Mit1	PCR amplified length variant
Prkcq	PCR amplified length variant	Pkcq-pA, Pkcq-pB
D2Mit316	PCR amplified length variant
D2Mit6	PCR amplified length variant

Notes

• Reference
  Based on the genetic data the authors indicate that Pkcq is approximately 0.75 cM distal of D2Mit1 on mouse Chromosome 2.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b>/<s> <s> <s> <s>
• Strain
  (C57BL/6J x SPR or SEG/Pas)F1
• Male Parent
  <b> <b> <b> <b>/<s> <s> <s> <s>
• Strain
  SPR or SEG/Pas or C57BL/6J
• Mapping Panel
  EUCIB
• Allele 1
  b from C57BL/6J
• Allele 2
  s from SPR or SEG/Pas

CROSS Data

MC #mice	D2Mit1	Prkcq	D2Mit316	D2Mit6
6	s	s	.	s
2	s	s	.	.
1	b	b	b	b
11	b	b	.	b
5	s	s	s	b
1	s	s	.	b
3	b	b	b	s
7	s	s	b	b
4	b	b	s	s
1	s	b	b	b
1	b	s	s	b

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D2Mit1	Prkcq	2	42	4.762	3.286