Mapping Data

Experiment

• Experiment
  TEXT-Genetic Cross
• Chromosome
  13
• Reference
  J:33579 Seymour AB, et al., An integrated genetic map of the pearl locus of mouse chromosome 13. Genome Res. 1996 Jun;6(6):538-44
• ID
  MGI:46813

Genes

Gene	Assay Type	Description
D13Mit9	PCR amplified length variant
D13Mit69	PCR amplified length variant
D13Mit285	PCR amplified length variant
D13Mit314	PCR amplified length variant
D13Mit27	PCR amplified length variant
D13Mit315	PCR amplified length variant
Vcan	Southern analysis	Cspg2 probe1
D13Mit202	PCR amplified length variant
Rasa1	Southern analysis	Rasa probe1
D13Mit192	PCR amplified length variant
D13Mit193	PCR amplified length variant
D13Mit286	PCR amplified length variant
D13Mit159	PCR amplified length variant
D13Mit106	PCR amplified length variant
Dhfr	SSCP	OD3PF, OD3PR
D13Mit105	PCR amplified length variant
D13Gor2	PCR amplified length variant
Arsb	Southern analysis	As1 probe1
D13Mit28	PCR amplified length variant
D13Mit29	PCR amplified length variant
Ap3b1	visible phenotype
D13Mit160	PCR amplified length variant
D13Mit258	PCR amplified length variant
D13Mit104	PCR amplified length variant
D13Mit161	PCR amplified length variant
D13Mit169	PCR amplified length variant
D13Mit108	PCR amplified length variant
F2r	PCR amplified length variant	Cf2r-pA, Cf2r-pB
D13Mit145	PCR amplified length variant
D13Mit144	PCR amplified length variant
Hexb	Southern analysis	Hexb probe1
Hmgcr	Southern analysis	Hmgcr probe1
D13Gor3	PCR amplified length variant
D13Mit109	PCR amplified length variant
Map1b	Southern analysis	Mtap5 probe1
Pde4d	Southern analysis	Pde4d probe1
Pik3r1	SSCP	Pik3r1F, Pik3r1R
Itga2	Southern analysis	Itga2 probe1
D13Mit146	PCR amplified length variant
D13Mit37	PCR amplified length variant
D13Gor4	PCR amplified length variant
Itga1	Southern analysis	Itga2 probe1
Htr1a	Southern analysis	Htr1a probe1

Notes

• Experiment
  The following order of loci was determined from 1250 progeny in a (PWK x SaMuPe)F1 x SaMuPe backcross: D13Mit9 - 0.7 cM - D13Mit69 - 0.3 cM - D13Mit285 - D13Mit314 - 1.7 cM - D13Mit315 - 0.6 cM - Cspg2 - D13Mit202 - 0.2 cM - Rasa - D13Mit192 - D13Mit193 - 0.3 cM - D13Mit286 - D13Mit159 - D13Mit106 - 0.1 cM - Dhfr - D13Mit105 - D13Gor2 - 0.1 cM - As1 - D13Mit28 - D13Mit29 - 0.3 cM - pe - D13Mit160 - D13Mit258 - D13Mit104 - D13Mit161 - D13Mit169 - D13Mit108 - 0.2 cM - Cfr2 - D13Mit145 - 0.3 cM - D13Mit144 - 0.1 cM - Hexb - Hmgcr - D13Gor3 - 0.5 cM - D13Mit109 - 0.4 cM - Mtap1b - D13Mit36 - 0.2 cM - Pde4d - Pik3r1 - Itga2 - D13Mit146 - 1.0 cM - D13Mit37 - D13Gor4 - 1.0 cM - Itga1 - 2.5 cM - Htr1a.