Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:11577 Walther C, et al., Pax: a murine multigene family of paired box-containing genes. Genomics. 1991 Oct;11(2):424-34
• ID
  MGI:46102

Genes

Gene	Assay Type	Description
Ctla4	reported elsewhere
Vil1	reported elsewhere
Myl1	reported elsewhere
Pax3	Southern analysis	cAIB

Notes

• Reference
  Authors use Hox-4, Hox-1.4 and c-jun for locus symbols Hoxd, Hoxa4 and Jun respectively. Summary haplotype data indicates 3 recombinants between Pax3 and Ctla4 whereas Table 2 indicates 5 recombinants between these two loci. Summary haplotype data indicates 1 recombinant between Pax5 and Etl2 whereas Table 2 indicates 2 recombinants between these two loci.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b>/<s> <s> <s> <s>
• Strain
  (C57BL/6 x SPE/Pas)F1
• Male Parent
  <b> <b> <b> <b>/<b> <b> <b> <b>
• Strain
  C57BL/6
• Allele 1
  b from C57BL/6
• Allele 2
  s from SPE/Pas

CROSS Data

MC #mice	Ctla4	Vil1	Myl1	Pax3
12	b	b	b	b
15	s	s	s	s
0	s	b	b	b
2	b	s	s	s
1	s	s	s	b
0	b	b	b	s
16	b	b	b	.
16	s	s	s	.
3	s	b	b	.
3	b	s	s	.
0	s	s	b	.
1	b	b	s	.
0	.	s	s	.
2	.	b	b	.

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Ctla4	Vil1	8	69	11.594	3.854
Vil1	Myl1	1	71	1.408	1.398
Myl1	Pax3	1	30	3.333	3.277