Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:31188 Pathak BG, et al., Mouse chromosomal location of four Na/H exchanger isoform genes. Genomics. 1996 Jan 15;31(2):261-3
• ID
  MGI:46033

Genes

Gene	Assay Type	Description
Il1r1	reported elsewhere
Slc9a2	Southern analysis	Slc9a2 genomic1
Slc9a4	Southern analysis	Slc9a4 cDNA1
Gls	Southern analysis	Gls cDNA1
Ctla4	reported elsewhere

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Il1r1	Slc9a2	Slc9a4	Gls	Ctla4
32	b	b	b	b	b
44	s	s	s	s	s
1	s	b	b	b	b
0	b	s	s	s	s
4	s	s	s	b	b
4	b	b	b	s	s
2	s	s	s	s	b
1	b	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Il1r1	Slc9a2	1	91
Il1r1	Slc9a4	1	91
Slc9a2	Slc9a4	0	64
Slc9a2	Gls	0	25
Slc9a4	Gls	0	25
Gls	Ctla4	0	30

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Il1r1	Slc9a2	2	180	1.111	0.781
Slc9a2	Slc9a4	0	152	0.000	0.000
Slc9a4	Gls	8	113	7.080	2.413
Gls	Ctla4	3	118	2.542	1.449