Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  5
• Reference
  J:27750 Marigo V, et al., Cloning, expression, and chromosomal location of SHH and IHH: two human homologues of the Drosophila segment polarity gene hedgehog. Genomics. 1995 Jul 1;28(1):44-51
• ID
  MGI:45427

Genes

Gene	Assay Type	Description
Gnai1	reported elsewhere
En2	reported elsewhere
Shh	Southern analysis	Shh cDNA
Il6	reported elsewhere

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b>/<s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b>/<b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Gnai1	En2	Shh	Il6
84	b	b	b	b
55	s	s	s	s
2	s	b	b	b
5	b	s	s	s
0	s	s	b	b
0	b	b	s	s
2	s	s	s	b
0	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Gnai1	En2	2	28
En2	Shh	1	14
Shh	Il6	1	13

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Gnai1	En2	9	178	5.056	1.642
En2	Shh	1	163	0.613	0.612
Shh	Il6	3	162	1.852	1.059