Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  4
• Reference
  J:22833 Pilz A, et al., Comparative mapping of 50 human chromosome 9 loci in the laboratory mouse. Genomics. 1995 Jan 1;25(1):139-49
• ID
  MGI:44807

Genes

Gene	Assay Type	Description
D4H9S3E	reported elsewhere
Aco1	Southern analysis	Irebp cDNA1
Galt	reported elsewhere
Cntfr	Southern analysis	Cntfr cDNA1
Pax5	reported elsewhere
Tmod1	Southern analysis	Tmod cDNA1
Xpa	Southern analysis	Xpa genomic2
Aldob	reported elsewhere
Abca1	Southern analysis	Abc1 probe1
Tal2	Southern analysis	Tal2 genomic1
Alad	reported elsewhere
Orm1	reported elsewhere
Ambp	reported elsewhere
Zfp37	Southern analysis	Zfp37 probe1
Tnc	reported elsewhere
Pappa	Southern analysis	Pappa genomic1
Tyrp1	reported elsewhere
Ifna	reported elsewhere
Ak4	Southern analysis	Ak3 cDNA1
D4Nds4	reported elsewhere

Notes

• Reference
  The authors us the locus symbols Hxb and Tyrp for Tnc and Tryp1 respectively.
• Experiment
  A/N is a testing stock derived from C3H deficeint for the enzyme steroid sulfatase (STS). Data submitted to MGD under accession # MGD-CREX-179.Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a>/<n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n>
• Strain
  (A/N x M. spretus)F1
• Male Parent
  <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a>/<a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a>
• Strain
  A/N
• Allele 1
  a from A/N
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	D4H9S3E	Aco1	Galt	Cntfr	Pax5	Tmod1	Xpa	Aldob	Abca1	Tal2	Alad	Orm1	Ambp	Zfp37	Tnc	Pappa	Tyrp1	Ifna	Ak4	D4Nds4
45	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a
40	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
1	s	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a
1	a	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
1	s	s	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a
2	a	a	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
1	s	s	s	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a
1	a	a	a	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
0	s	s	s	s	s	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a
1	a	a	a	a	a	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
1	s	s	s	s	s	s	a	a	a	a	a	a	a	a	a	a	a	a	a	a
0	a	a	a	a	a	a	s	s	s	s	s	s	s	s	s	s	s	s	s	s
2	s	s	s	s	s	s	s	s	a	a	a	a	a	a	a	a	a	a	a	a
3	a	a	a	a	a	a	a	a	s	s	s	s	s	s	s	s	s	s	s	s
0	s	s	s	s	s	s	s	s	s	a	a	a	a	a	a	a	a	a	a	a
1	a	a	a	a	a	a	a	a	a	s	s	s	s	s	s	s	s	s	s	s
0	s	s	s	s	s	s	s	s	s	s	a	a	a	a	a	a	a	a	a	a
2	a	a	a	a	a	a	a	a	a	a	s	s	s	s	s	s	s	s	s	s
1	s	s	s	s	s	s	s	s	s	s	s	a	a	a	a	a	a	a	a	a
4	a	a	a	a	a	a	a	a	a	a	a	s	s	s	s	s	s	s	s	s
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	a	a	a	a	a
1	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	s	s	s	s	s
4	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	a	a	a
1	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	s	s	s
0	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	a	a
6	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	s	s
3	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	a
3	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	s

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D4H9S3E	Aco1	2	126	1.587	1.113
Aco1	Galt	3	126	2.381	1.358
Galt	Cntfr	2	126	1.587	1.113
Cntfr	Pax5	0	126	0.000	0.000
Pax5	Tmod1	1	126	0.794	0.790
Tmod1	Xpa	1	126	0.794	0.790
Xpa	Aldob	0	126	0.000	0.000
Aldob	Abca1	5	126	3.968	1.739
Abca1	Tal2	1	126	0.794	0.790
Tal2	Alad	2	126	1.587	1.113
Alad	Orm1	5	126	3.968	1.739
Orm1	Ambp	0	126	0.000	0.000
Ambp	Zfp37	0	126	0.000	0.000
Zfp37	Tnc	0	126	0.000	0.000
Tnc	Pappa	2	126	1.587	1.113
Pappa	Tyrp1	0	126	0.000	0.000
Tyrp1	Ifna	5	126	3.968	1.739
Ifna	Ak4	6	126	4.762	1.897
Ak4	D4Nds4	6	126	4.762	1.897