Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  2
• Reference
  J:17235 Abbott C, et al., Linkage mapping around the ragged (Ra) and wasted (wst) loci on distal mouse chromosome 2. Genomics. 1994 Mar 1;20(1):94-8
• ID
  MGI:43812

Genes

Gene	Assay Type	Description
Il1b	Southern analysis
D2Mit52	PCR amplified length variant
D2Ucl1	PCR amplified length variant	D2Ucl1-pA, D2Ucl1-pB
Gnas	PCR amplified length variant	Gnas-pA, Gnas-pB
D2Mit73	PCR amplified length variant
D2Mit74	PCR amplified length variant
Chrna4	Southern analysis
Eef1a2	visible phenotype

Notes

• Reference
  D2Mit52 and Gnas were typed only in mice recombinant between Il1b and Acra4.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (STOCK Sox18 Eef1a2 x M. spretus)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  STOCK Sox18 Eef1a2
• Allele 1
  c from STOCK Sox18 Eef1a2
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Il1b	D2Mit52	D2Ucl1	Gnas	D2Mit73	D2Mit74	Chrna4	Eef1a2
66	c	c	c	c	c	c	c	c
19	s	c	c	c	c	c	c	c
3	s	s	c	c	c	c	c	c
1	c	c	c	c	s	s	s	s
1	s	s	s	s	s	c	c	c
1	s	s	s	s	s	s	c	c
3	s	s	s	s	s	s	s	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Il1b	D2Mit52	19	94	20.213	4.142
D2Mit52	D2Ucl1	3	94	3.191	1.813
D2Ucl1	Gnas	0	94	0.000	0.000
Gnas	D2Mit73	1	94	1.064	1.058
D2Mit73	D2Mit74	1	94	1.064	1.058
D2Mit74	Chrna4	1	94	1.064	1.058
Chrna4	Eef1a2	3	94	3.191	1.813