Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  2
• Reference
  J:151902 Favor J, et al., Analysis of Pax6 Contiguous Gene Deletions in the Mouse, Mus musculus, Identifies Regions Distinct from Pax6 Responsible for Extreme Small-Eye and Belly-Spotting Phenotypes. Genetics. 2009 Aug;182(4):1077-88
• ID
  MGI:4366956

Genes

Gene
Del(2)Pax6^11Neu
Del(2)Pax6^12Neu
Del(2)Pax6^13Neu
Rcn1
Pax6
Elp4
Immp1l
Dnajc24
Dcdc5
Mpped2
Fshb
Kcna4
Rpl35
Mettl15
Kif18a
Bdnf
Lin7c
Lgr4
Bbox1
Slc5a12
Muc15
Or4f52
Or4f53
Or4k35
Or4f54
Or4g16
Or4k36
Or4k37
Or4k77
Or4g17
Or4k39
Or4k40
Or4k41
Or4g7
Or4g7
Or4f4b
Or4k42
Or4f4-ps1
Or4k44
Or4k45

Notes

• Experiment
  The chromosome 2 Del(2)Pax6^11Neu deletion was placed between 105.001 and 105.541 Mb. The deletion is 540,470 bp and includes Rcn1 and Pax6. The distal breakpoint of Pax6^11Neu resides within intron 9 - 10 of Elp4.
  
  The chromosome 2 deletion Del(2)Pax6^12Neu was placed between 105.299 and 113.380 a distance of approximately 6.08 Mb. The deletion begins distal to the Rcn1 gene and includes the Pax6 and Elp4 genes, and the following genes distal to Elp4 (Immp1L, Dph4(Dnajc24), Dcdc5, Mppede2 (Mpped2), Fshb, Kcna4, Rpl35a, Hadhb (chr 5 MGI and Vega, but BLATS to 2), Mett5d1, Kif18a, Bdnf, Lin7c, Lgr4, Cdc34, Bbox1, Slc5a12, and Muc15) and also includes 18 genes within the Olfr gene cluster at Chr 2 111.06 - 11.90 Mb (Olfr1275 - Olfr1281, Olfr1283 -Olfr1291, Olfr1294, and Olfr1295).
  
  The chromosome 3 deletion Del(2)Pax6^13Neu was placed between 105.488 and 105.726 Mb a distance of 237,725 bp and includes the entire Elp4 and ends in intron 2-3 of Immp1l.