Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  6
• Reference
  J:11320 Siracusa LD, et al., Chromosomal location of the octamer transcription factors, Otf-1, Otf-2, and Otf-3, defines multiple Otf-3-related sequences dispersed in the mouse genome. Genomics. 1991 Jun;10(2):313-26
• ID
  MGI:42787

Genes

Gene	Assay Type	Description
Tcrb	reported elsewhere
Hoxa5	Southern analysis	p576
Pou5f1-rs5	Southern analysis	3' Oft3 probe or 5' Otf3 probe
Cbl-ps1	reported elsewhere
Igk	reported elsewhere

Notes

• Reference
  Authors use Otf-3a, Otf-3b, Otf-3c, Otf-3d, Otf-3e, Otf-3f, Otf-3g and Otf-3h for locus symbols Pou5f1-rs1, Pou5f1-rs2, Pou5f1-rs3, Pou5f1-rs4, Pou5f1-rs5, Pou5f1-rs6, Pou5f1 and Pou5f1-rs8 respectively.

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Tcrb	Hoxa5	9	184
Hoxa5	Pou5f1-rs5	6	182
Pou5f1-rs5	Cbl-ps1	0	113
Pou5f1-rs5	Igk	3	181

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Hoxa5	Pou5f1-rs5	6	188	3.191	1.282
Tcrb	Hoxa5	9	193	4.663	1.518
Pou5f1-rs5	Cbl-ps1	0	113	0.000	0.000
Pou5f1-rs5	Igk	3	184	1.630	0.934