Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  4
• Reference
  J:16165 Pilz A, et al., Linkage mapping of the Aldo-2, Pax-5, Ambp, and D4h9S3E loci on mouse chromosome 4 in the region of homology with human chromosome 9. Genomics. 1993 Dec;18(3):705-8
• ID
  MGI:42667

Genes

Gene	Assay Type	Description
D4Nds4	PCR amplified length variant
D4H9S3E	Southern analysis	D4H9S3E genomic
Galt	Southern analysis	Galt probe
Pax5	Southern analysis	5Sg8
Aldob	Southern analysis	Aldo2 genomic
Alad	Southern analysis
Orm1	PCR amplified length variant
Ambp	Southern analysis	AMBP cDNA
Tnc	Southern analysis	Hxb cDNA
Tyrp1	Southern analysis	TRP-1 cDNA
Ifna	PCR amplified length variant

Notes

• Reference
  AN is a C3H stock deficient in Sts.

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (AN x M. spretus)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  AN
• Allele 1
  c from AN
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
D4Nds4	D4H9S3E	2	124
D4H9S3E	Galt	5	121
Galt	Pax5	1	125
Pax5	Aldob	6	120
Aldob	Alad	8	118
Alad	Orm1	0	126
Orm1	Ambp	0	126
Ambp	Tnc	2	124
Tnc	Tyrp1	5	121
Tyrp1	Ifna	6	120

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Aldob	Alad	8	126	6.349	2.172
Ambp	Tnc	2	126	1.587	1.113
D4H9S3E	Galt	5	126	3.968	1.739
D4Nds4	D4H9S3E	2	126	1.587	1.113
Galt	Pax5	1	126	0.794	0.790
Alad	Orm1	0	126	0.000	0.000
Orm1	Ambp	0	126	0.000	0.000
Pax5	Aldob	6	126	4.762	1.897
Tyrp1	Ifna	6	126	4.762	1.897
Tnc	Tyrp1	5	126	3.968	1.739