Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  7
• Reference
  J:15617 Brown SD, et al., Mapping the Hrc gene to proximal mouse chromosome 7: delineation of a conserved linkage group with human 19q. Genomics. 1993 Nov;18(2):459-61
• ID
  MGI:42574

Genes

Gene	Assay Type	Description
D7Smh483	Southern analysis	D7Smh483 probe
Prkcg	Southern analysis	Pkcc cDNA 2
D7H19S51	Southern analysis	D7H19S51 probe
Ckm	Southern analysis	Ckmm genomic 1
Atp1a3	Southern analysis	Atp1a3 probe
Tgfb1	Southern analysis	Tgfb1 probe
Ryr1	Southern analysis	Ryr cDNA 1
Nudt19	Southern analysis	D7Rp2 probe
Hrc	Southern analysis	Hrc cDNA
Klk1b3	Southern analysis	Ngfg probe
Myod1	Southern analysis	Myod1 cDNA
Oca2	visible phenotype

Notes

• Experiment
  p represents N2 mice typing as parents.Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (M. m. domesticus-Oca2

  Tyr x M. spretus)F1

• Male Parent
  <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>/<d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>
• Strain
  M. m. domesticus-Oca2

  Tyr

• Allele 1
  d from M. m. domesticus
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	D7Smh483	Prkcg	D7H19S51	Ckm	Atp1a3	Tgfb1	Ryr1	Nudt19	Hrc	Klk1b3	Myod1	Oca2
47	p	p	p	p	p	p	p	p	p	p	p	p
1	d	d	s	s	s	s	s	s	s	s	s	s
1	s	s	d	d	d	d	d	d	d	d	d	d
1	d	d	d	s	s	s	s	s	s	s	s	s
2	d	d	d	d	d	d	s	s	s	s	s	s
2	s	s	s	s	s	s	d	d	d	d	d	d
1	d	d	d	d	d	d	d	s	s	s	s	s
3	s	s	s	s	s	s	s	d	d	d	d	d
4	d	d	d	d	d	d	d	d	s	s	s	s
4	s	s	s	s	s	s	s	s	d	d	d	d
1	d	d	d	d	d	d	d	d	d	s	s	s
1	s	s	s	s	s	s	s	s	s	d	d	d
1	d	d	d	d	d	d	d	d	d	d	s	s
2	d	d	d	d	d	d	d	d	d	d	d	s
1	s	s	s	s	s	s	s	s	s	s	s	d

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D7Smh483	Prkcg	0	72	0.000	0.000
Prkcg	D7H19S51	2	72	2.778	1.937
D7H19S51	Ckm	1	72	1.389	1.379
Ckm	Atp1a3	0	72	0.000	0.000
Atp1a3	Tgfb1	0	72	0.000	0.000
Tgfb1	Ryr1	4	72	5.556	2.700
Ryr1	Nudt19	4	72	5.556	2.700
Nudt19	Hrc	8	72	11.111	3.704
Hrc	Klk1b3	2	72	2.778	1.937
Klk1b3	Myod1	1	72	1.389	1.379
Myod1	Oca2	3	72	4.167	2.355