Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  19
• Reference
  J:14811 Henderson JT, et al., The gene for ciliary neurotrophic factor maps distal to CD5 and Ly-10 on murine chromosome 19. Mouse Genome. 1993;91(3):561-563
• ID
  MGI:42552

Genes

Gene	Assay Type	Description
D19Byu1	reported elsewhere
D19Rp19e	reported elsewhere
Slc3a2	reported elsewhere
D19Byu2	reported elsewhere
Cd5	reported elsewhere
Osbp	reported elsewhere
Cntf	Southern analysis	Cntf probe
Gsl5	reported elsewhere
D19Byu3	reported elsewhere
D19J1	reported elsewhere

Notes

• Experiment
  Authors suggest Cntf lies +/- 0.7 cM from Osbp. Text states BXD strains 3 and 4 are extinct which conflicts with data for strains 3 and 4 in the table.

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32
D19Byu1	D	B	B	D	D	B	B	B	D	B	B	B	B	B	B	B	B	D	D	B	D	B	B	B	D	B
D19Rp19e	D	B	B	D	D	B	B	B	D	B	B	B	B	B	D	B	B	D	D	B	D	B	B	B	D	B
Slc3a2	D	B	B	D	D	B	B	B	D	B	B	B	B	B	D	B	B	D	D	B	D	B	B	B	D	B
D19Byu2	D	B	B	D	D	B	B	B	D	B	B	B	B	B	D	B	B	D	D	B	D	B	B	D	D	B
Cd5	B	B	B	D	D	B	B	B	D	B	B	B	B	B	D	B	B	D	D	B	D	B	B	D	D	B
Osbp	B	B	B	D	D	B	D	B	D	B	B	B	B	B	D	B	B	D	D	B	D	B	B	D	D	B
Cntf	B	B	B	D	D	B	D	B	D	B	B	B	B	B	D	B	B	D	D	B	D	B	B	D	D	B
Gsl5	B	B	B	D	D	B	D	B	D	B	B	D	B	B	.	B	B	B	B	B	D	B	B	D	B	B
D19Byu3	B	B	B	D	D	B	D	B	D	B	B	D	B	B	D	B	B	B	B	B	D	B	B	D	B	B
D19J1	D	B	B	D	D	B	D	B	B	B	B	D	B	B	D	.	B	B	B	B	D	B	B	D	B	B

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D19Byu1	D19Rp19e	1	26	1.020	1.062
D19Rp19e	Slc3a2	0	26	0.000	0.000
Slc3a2	D19Byu2	1	26	1.020	1.062
D19Byu2	Cd5	1	26	1.020	1.062
Cd5	Osbp	1	26	1.020	1.062
Osbp	Cntf	0	26	0.000	0.000
Cntf	Gsl5	4	25	5.263	3.174
Gsl5	D19Byu3	0	25	0.000	0.000
D19Byu3	D19J1	2	25	2.273	1.752