Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  3
• Reference
  J:10139 Moseley WS, et al., Definition of mouse chromosome 1 and 3 gene linkage groups that are conserved on human chromosome 1: evidence that a conserved linkage group spans the centromere of human chromosome 1. Genomics. 1989 Nov;5(4):899-905
• ID
  MGI:42455

Genes

Gene	Assay Type	Description
Car2	Southern analysis	pMCaII
Mecom	Southern analysis	pUC1.OH3
Gba1	Southern analysis	pGC1
S100a6	Southern analysis	hp2A9
Cd2	Southern analysis	MT11.4
Atp1a1	Southern analysis	z4A
Tshb	Southern analysis	pTSH(beta)
Amy2a5	Southern analysis	probe 3
Egf	Southern analysis	pmegf10b

Notes

• Reference
  Lamc1 was reported as Lamb2 in this article.
• Experiment
  A later report from this lab (Oakey, Immunogenetics 35:279-282, 1992) states the apparent crossovers reported in this paper between Gba and Cacy have been determined to be due to heterozygosity in the M. spretus parent for a Gba TaqI polymorphism.Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C3H/HeJ-Fasl x M. spretus)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  C3H/HeJ-Fasl/J
• Mapping Panel
  Seldin
• Allele 1
  c from C3H/HeJ-Fasl/J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Car2	Mecom	Gba1	S100a6	Cd2	Atp1a1	Tshb	Amy2a5	Egf
22	s	s	s	s	s	s	s	s	s
25	c	c	c	c	c	c	c	c	c
4	c	s	s	s	s	s	s	s	s
11	c	c	s	s	s	s	s	s	s
15	s	s	c	c	c	c	c	c	c
4	c	c	c	s	s	s	s	s	s
2	c	c	c	c	s	s	s	s	s
2	s	s	s	s	c	c	c	c	c
2	c	c	c	c	c	c	c	s	s
7	c	c	c	c	c	c	c	c	s
6	s	s	s	s	s	s	s	s	c
1	c	s	c	c	c	c	c	c	c
2	c	c	s	s	s	s	s	s	c
8	s	s	c	s	s	s	s	s	s
2	c	c	c	s	s	s	s	s	c
2	s	s	c	c	c	c	c	c	s

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Car2	Mecom	5	115	4.348	1.902
Mecom	Gba1	39	115	33.913	4.415
Gba1	S100a6	14	115	12.174	3.049
S100a6	Cd2	4	115	3.478	1.709
Cd2	Atp1a1	0	115	0.000	0.000
Atp1a1	Tshb	0	115	0.000	0.000
Tshb	Amy2a5	2	115	1.739	1.219
Amy2a5	Egf	19	115	16.522	3.463