Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  19
• Reference
  J:4593 Eicher EM, et al., Corrected centromere orientation for mouse chromosome 19 MIT markers. Mamm Genome. 1993;4(4):223-5
• ID
  MGI:42013

Genes

Gene	Assay Type
Gstp2	reported elsewhere
Pcx	reported elsewhere
Seao	reported elsewhere
Slc3a2	reported elsewhere
D19Sel2	reported elsewhere
Fth1	reported elsewhere
Cd5	reported elsewhere
Ms4a1	reported elsewhere
Osbp	reported elsewhere
Pomc-ps1	reported elsewhere
D19Sel3	reported elsewhere
Ide	reported elsewhere
Cyp2c29	reported elsewhere
Gpin1	reported elsewhere
Blnk	reported elsewhere
D19Pas2	reported elsewhere
Ins1	reported elsewhere
D19Mit1	reported elsewhere
D19Mit3	Southern analysis
Adrb1	reported elsewhere
D19Sel1	reported elsewhere
D19Mit6	Southern analysis

Notes

• Reference
  This paper provides an order for genes in each cross and the one RI strain set as they appear on Chromosome 19. A gene order for all the genes analyzed in this paper was not provided and is not given here.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C3H/HeJ-Fasl x M. spretus)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  C3H/HeJ-Fasl/J
• Mapping Panel
  Seldin
• Allele 1
  c from C3H/HeJ-Fasl/J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Gstp2	Pcx	Seao	Slc3a2	D19Sel2	Fth1	Cd5	Ms4a1	Osbp	Pomc-ps1	D19Sel3	Ide	Cyp2c29	Gpin1	Blnk	D19Pas2	Ins1	D19Mit1	D19Mit3	Adrb1	D19Sel1	D19Mit6
13	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
7	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
0	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
1	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
3	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s
3	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c
3	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s
0	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c
0	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s
2	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c
1	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s
2	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c
0	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c
2	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s
0	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Gstp2	Pcx	0	38	0.000	0.000
Pcx	Seao	0	38	0.000	0.000
Seao	Slc3a2	0	38	0.000	0.000
Slc3a2	D19Sel2	0	38	0.000	0.000
D19Sel2	Fth1	1	38	2.632	2.597
Fth1	Cd5	0	38	0.000	0.000
Cd5	Ms4a1	0	38	0.000	0.000
Ms4a1	Osbp	0	38	0.000	0.000
Osbp	Pomc-ps1	0	38	0.000	0.000
Pomc-ps1	D19Sel3	6	38	15.789	5.915
D19Sel3	Ide	3	38	7.895	4.374
Ide	Cyp2c29	0	38	0.000	0.000
Cyp2c29	Gpin1	0	38	0.000	0.000
Gpin1	Blnk	0	38	0.000	0.000
Blnk	D19Pas2	2	38	5.263	3.622
D19Pas2	Ins1	3	38	7.895	4.374
Ins1	D19Mit1	1	38	2.632	2.597
D19Mit1	D19Mit3	0	38	0.000	0.000
D19Mit3	Adrb1	0	38	0.000	0.000
Adrb1	D19Sel1	0	38	0.000	0.000
D19Sel1	D19Mit6	2	38	5.263	3.622