Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  5
• Reference
  J:2297 Altherr MR, et al., Chromosome mapping of the rod photoreceptor cGMP phosphodiesterase beta-subunit gene in mouse and human: tight linkage to the Huntington disease region (4p16.3). Genomics. 1992 Apr;12(4):750-4
• ID
  MGI:40881

Genes

Gene	Assay Type	Description
Qdpr	Southern analysis	DHPR13
Cnga1	reported elsewhere	Pittler, et al., J Biol Chem 267:6257-6262, 1992
Kit	reported elsewhere	Smith, et al., PNAS 88:4811-4815, 1991
Pdgfra	reported elsewhere	Smith, et al., PNAS 88:4811-4815, 1991
Csn1s1	reported elsewhere	Smith, et al., PNAS 88:4811-4815, 1991
Afp	reported elsewhere	Seldin et al., Cytogenet Cell Genet 54:68-70, 1990
Cxcl1	reported elsewhere	Seldin et al., Cytogenet Cell Genet 54:68-70, 1990
Pde6b	Southern analysis	MPB5
Gusb	reported elsewhere	Seldin et al., Cytogenet Cell Genet 54:68-70, 1990

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C3H/HeJ-Fasl x M. spretus)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  C3H/HeJ-Fasl/J
• Mapping Panel
  Seldin
• Allele 1
  c from C3H/HeJ-Fasl/J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Qdpr	Cnga1	Kit	Pdgfra	Csn1s1	Afp	Cxcl1	Pde6b	Gusb
27	c	c	c	c	c	c	c	c	c
50	s	s	s	s	s	s	s	s	s
5	c	s	s	s	s	s	s	s	s
5	s	c	c	c	c	c	c	c	c
1	c	c	s	s	s	s	s	s	s
0	s	s	c	c	c	c	c	c	c
1	c	c	c	c	s	s	s	s	s
0	s	s	s	s	c	c	c	c	c
0	c	c	c	c	c	s	s	s	s
1	s	s	s	s	s	c	c	c	c
1	c	c	c	c	c	c	s	s	s
1	s	s	s	s	s	s	c	c	c
5	c	c	c	c	c	c	c	s	s
2	s	s	s	s	s	s	s	c	c
3	c	c	c	c	c	c	c	c	s
11	s	s	s	s	s	s	s	s	c
1	s	c	c	c	c	c	c	c	s

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Qdpr	Cnga1	11	114	9.649	2.765
Cnga1	Kit	1	114	0.877	0.873
Kit	Pdgfra	0	114	0.000	0.000
Pdgfra	Csn1s1	1	114	0.877	0.873
Csn1s1	Afp	1	114	0.877	0.873
Afp	Cxcl1	2	114	1.754	1.230
Cxcl1	Pde6b	7	114	6.140	2.248
Pde6b	Gusb	15	114	13.158	3.166