Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  3
• Reference
  J:1577 Nadeau JH, et al., Multilocus markers for mouse genome analysis: PCR amplification based on single primers of arbitrary nucleotide sequence. Mamm Genome. 1992;3(2):55-64
• ID
  MGI:40742

Genes

Gene	Assay Type	Description
Cnpl	reported elsewhere
D3J1	PCR amplified length variant	8d
Xmmv65	reported elsewhere
Xmmv22	reported elsewhere
Pmv38	reported elsewhere
Amy1	reported elsewhere
D3J3	PCR amplified length variant	6a
Fabp2	reported elsewhere
Pmv39	reported elsewhere

Notes

• Reference
  Revised gene symbols: Egf, Odc-rs8, D16J2, Gnb-ps1, Xmmv22 and Hoxa3 (formerly Egf-1, Odc-8, D0J2, Gnb-1, Env-22 and Hox-1.5 respectively). A locus designated Fox1 was reported in this paper but has since been dropped as a legitimate locus (B. Paigen, J.Marshall, personal communication).

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32
Cnpl	B	B	D	B	B	D	D	D	B	B	D	B	B	B	B	D	D	B	B	D	D	D	B	D	B	B
D3J1	B	B	D	B	B	B	D	B	B	B	D	B	B	B	B	.	D	B	B	D	B	D	B	D	B	B
Xmmv65	B	B	D	B	B	B	D	B	B	B	D	B	B	B	B	D	D	B	B	D	B	D	B	D	B	B
Xmmv22	B	B	D	B	B	B	D	B	B	B	D	B	B	B	B	D	D	B	B	D	B	D	B	D	B	B
Pmv38	B	B	B	B	B	B	D	B	B	B	D	B	B	B	B	.	D	B	B	D	B	D	B	D	B	D
Amy1	B	D	B	B	D	B	D	D	D	B	D	B	B	B	B	D	D	B	B	D	B	D	B	D	B	B
D3J3	B	D	B	B	D	B	D	D	D	B	D	B	B	B	D	.	.	B	B	D	B	D	B	B	B	D
Fabp2	B	D	B	B	D	B	D	D	D	B	D	B	B	B	D	.	.	B	B	D	B	D	B	B	B	D
Pmv39	B	D	B	B	D	B	D	D	D	B	D	B	D	B	D	D	D	D	B	D	B	D	B	B	B	D

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Cnpl	D3J1	3	25	3.659	2.416
D3J1	Xmmv65	0	25	0.000	0.000
Xmmv65	Xmmv22	0	26	0.000	0.000
Xmmv22	Pmv38	2	25	2.273	1.752
Pmv38	Amy1	5	25	7.143	4.082
Amy1	D3J3	3	24	3.846	2.557
D3J3	Fabp2	0	24	0.000	0.000
Fabp2	Pmv39	2	24	2.381	1.842