Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  10
• Reference
  J:10992 Kozak CA, et al., Molecular genetic markers spanning mouse chromosome 10. Genomics. 1990 Nov;8(3):519-24
• ID
  MGI:39667

Genes

Gene	Assay Type	Description
Ifngr1	Southern analysis	pMuIFN-gammaR36
Myb	Southern analysis	pGAM2b
Prf1	Southern analysis	pFP6
Hsp90b1	Southern analysis	pMA2
Ifng	Southern analysis	pMifkol
Gli1	Southern analysis	pMGLI-RS

Notes

• Experiment
  Backcross progeny from F1 mating using different inbred strain progenitors were pooled: 8 were from F1 mating the AKR/J, 28 from C58/J and 54 from NFS/N.Offspring types indicate alleles inherited from F1 parent.
  F1 direction known.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <a> <a> <a> <a> <a> <a>/<m> <m> <m> <m> <m> <m>
• Strain
  (AKR/J NFS/N or C58/J x SKIVE)F1
• Male Parent
  <m> <m> <m> <m> <m> <m>/<m> <m> <m> <m> <m> <m>
• Strain
  SKIVE
• Allele 1
  a from AKR/J and C58/J or NFS/N
• Allele 2
  m from SKIVE

CROSS Data

MC #mice	Ifngr1	Myb	Prf1	Hsp90b1	Ifng	Gli1
26	m	m	m	m	m	m
18	a	a	a	a	a	a
0	a	m	m	m	m	m
0	m	a	a	a	a	a
17	a	a	m	m	m	m
1	m	m	a	a	a	a
8	a	a	a	m	m	m
2	m	m	m	a	a	a
3	a	a	a	a	m	m
7	m	m	m	m	a	a
1	a	a	a	a	a	m
3	m	m	m	m	m	a
1	a	a	m	m	m	a
1	m	m	a	a	m	m
1	a	a	m	m	a	a
1	m	a	a	a	m	m

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Ifngr1	Myb	1	90	1.111	1.105
Myb	Prf1	21	90	23.333	4.458
Prf1	Hsp90b1	10	90	11.111	3.313
Hsp90b1	Ifng	13	90	14.444	3.706
Ifng	Gli1	5	90	5.556	2.415